Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0041 ATGGTGGCAGCATATTCTCCCTTGTCAGTCAGGGGTAAAATGGTCCGCATGGATGCAGCCTCAACAGCTTTAACGTCATTTCTTTCTCCCAAACGCAACAACTTCATCGAAGCGGACGCTCACACTAAAATCCTCCATGCCTTAATTTGCATTGCTTCCCTGAGAAAGCAAAATTTCCCATTTTCTCCCCGCAAAATAATTATGTCGGACGCTTTGATCAATGGGCTCGCTGGAGCAGGAGGAGGGATCATTGCTCAGCTCATCACATATCCTCTCCAAACTGTAAACACCCGTCAACAGACCGAGCGTGACCCGAAGAAAGATCAGAGGAATCTTGGAACTCTTGAGCAAATGTGCCAGGTGGTAAAGCACGAGGGGTGGCAGCGATTGTACGGAGGATTGATGCCGTCGCTTGCGGGCACAGCTGCGTCTCAGGGTGTTTACTACTACTTCTATCAGATATTCAGGATCAAGGCTGAAGCAGCTGCTCTAGAACAGAAAAGGATTGGCATTGGTGATGGATCAGTTGGGATGTTATCCTCCCTACTTGTCGCTGCTTTATCTGGGTGTGTTAATGTGCTCTTGACAAATCCCATATGGGTGGTAGTTACACGGATGCAGACTCATAGAAAAGATTCGAAAAGAACCACGCCTAGTCATGATTTGTCTGTAGCCACAGAACAAACAATTCTTTCTGCAGCTGAACCTCCTCCTTATGGAACTAGTCATGTGATTCAAGAAGTGTATGGTGAAGCTGGAGTCCGGGGTTTCTGGAAAGGTGTATTGCCAACATTGATCATGGTAAGCAATCCTTCTATACAGTTCATGCTGTATGAAGCCATGTTGTCACGGTTAAAAAGAAGACGTGCTTTGAGTAAGAAGAGTACTGATGGGGTTACTGCTTTAGAGATATTCCTTCTTGGGGCTTTGGCTAAGCTTGGAGCTACTGTTGTAACTTATCCTCTTCTAGTTGTGAAGGCTAGGCTTCAAGCAAGGCAGGTTAAGACTGAAGACAAGAGGCACCATTATAAAGGAACATGGGATGCAATTATAAAGATGATACGCTATGAAGGGTTTTATGGATTTTACCATGGTATGAGCACTAAAATTGTACAGAGTGTGCTGGCCGCAGCTGTTTTGTTCATGGTGAAGGAAGAGCTAGTTAAGGGGGCTCGTTTCTTGCTTGCTAAGGATGCTGCCAACGCTGCAAAGGCAAAGCCTCTATGA 1227 0.4572 MVAAYSPLSVRGKMVRMDAASTALTSFLSPKRNNFIEADAHTKILHALICIASLRKQNFPFSPRKIIMSDALINGLAGAGGGIIAQLITYPLQTVNTRQQTERDPKKDQRNLGTLEQMCQVVKHEGWQRLYGGLMPSLAGTAASQGVYYYFYQIFRIKAEAAALEQKRIGIGDGSVGMLSSLLVAALSGCVNVLLTNPIWVVVTRMQTHRKDSKRTTPSHDLSVATEQTILSAAEPPPYGTSHVIQEVYGEAGVRGFWKGVLPTLIMVSNPSIQFMLYEAMLSRLKRRRALSKKSTDGVTALEIFLLGALAKLGATVVTYPLLVVKARLQARQVKTEDKRHHYKGTWDAIIKMIRYEGFYGFYHGMSTKIVQSVLAAAVLFMVKEELVKGARFLLAKDAANAAKAKPL 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0041 408 ProSiteProfiles Solute carrier (Solcar) repeat profile. 299 390 IPR018108 -
Lele03g0041 408 SUPERFAMILY Mitochondrial carrier 70 386 IPR023395 -
Lele03g0041 408 ProSiteProfiles Solute carrier (Solcar) repeat profile. 176 284 IPR018108 -
Lele03g0041 408 ProSiteProfiles Solute carrier (Solcar) repeat profile. 69 158 IPR018108 -
Lele03g0041 408 Pfam Mitochondrial carrier protein 300 387 IPR018108 -
Lele03g0041 408 Pfam Mitochondrial carrier protein 74 156 IPR018108 -
Lele03g0041 408 Pfam Mitochondrial carrier protein 176 286 IPR018108 -
Lele03g0041 408 Gene3D Mitochondrial carrier domain 47 166 IPR023395 -
Lele03g0041 408 Gene3D Mitochondrial carrier domain 167 391 IPR023395 -
Lele03g0041 408 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 68 392 IPR044712 GO:0006862|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0041 Lele-ChrLele03 253801 258531 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0041 91 395 Chloroplast and Mitochondria Gene Families AT2G47490 29.582 2.41e-30 117