Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0033 ATGCCTTTTATCGGCACTCAACTAAAATGCAAGGCTTGTGAGAAAATTGTCTATCCTGTTGATCAACTATCCGCCGATGGCACTTCTTACCATAAGGCTTGCTTCAGGTGCTCTCAAGGAACCTTGAAGCTAAGCAACTATTCCTCAATGGAAGGCGTTCTTTATTGCAAGCCTCATTATGGGCAGCTCTTCAAGGAGACAGGCGGTTTCAACAAAAACTTCCAGTCACAACAATCCGTTTCCACTCATGGTCTGCATCCCAAACGATGTCGTCTTAGGAACTCTGAGAACCCCTCGCTGCTGCGACTAGCATTCTGGCGCGTCCCTGGCGAAGCGTCGTCGTCGGGAATGGAATCGGTTTCAAACCTCGGCAACCTTATCCTTCAGTTGTCCGCGCCAATTTCTGAGTGTCTTGCCCACGCACCCTACGCTCCACCTGAAGGCTCCAATGTTTCCGCCAAATCTCTACTCGAATCTCTTCTCCCAAGAAAAATCCTGCCTCAAGATTCTAACTTTCACGCAACTATCAGAGATTTTTCTCTAGCATGTGCTTTGCTATCCTCCTCCAGCTTCAAGCCCTTAACCCATGACTATTCGGACCTTCTCTCATGGATCCCCGATCATCTTTCCCGACTCGCTAGCTCTGCTTTTTACGATTTCTCCAAAGTGTACCTAACTGCTTTTAATGACAAAAATTCGAAGAGGGTTGCTGAATTGGGCTTAAAGTGTGATTTCGTACCTCAGGATCAGAGATTGATGTTGGAATTGATGCCTGAGGTTTTGCTTTCTCTTAAAGACAGAATCAAAGAGAGTTCTATCGATAAGTCTGACGAAACTGATGAGTTCTCTGCTGCATCCGCGAGAGCCCCTGTGGGATATGCAATTGTGGCTGCTTATCAGTTGAGATGGTTTATTTCCCAGGTTCATTATCCTCATTTAGGAAAGTTGTGCGGATTAGTGATACCTTCTGCGCTTACTGCCGTTGACCATTGGTCGTCCGAGGTGAAGGGACAGGGTATGATTAGCTTCTGTCATCTTGCAAAAAATGTGGATACTACTGAGCTCTGTGGGTATGCAGATGTAATTCTTGATGCTTGCTGCCAGAATATTGCAACTAGCGATGAGATCTGGTGCCATGTTGTAGAGACTTCAGTAGTTCTTGTAACTTATGTTCAGAGAAATAATCCACGTAGCCCATGGTATGAAAGAATACTAAATGAGATGTTAAGTCACTTGGAGCGCCAGCCCAGAAACAAAGAACGTCGCATTGCTTGGCTTGAATATGTTGGTCCCTTATTTGATGGAGTTGCTCTTGTGCTATTAGCTCACTTTAGGCGCATTTTCCCGTTGTTCTTTCAGTGGATGCATGCTGATGATGATGGGACCCTTATATTGGTTCTAAAACGTACTTTTACAATTCTGAGACAAACTTGGATTAGGGACTCGCCATATATTGAAAGATTGGTAGAGGAGCTTGTTCTCGTGTACAAGGAGGCAGCGTTAAGAAAAACTCGAGAAGAAATTAGAGAACATACCCGACAGATACTGATCCTACTTCAACAAAGCAAAGGCCTGCAGTTTCAAGCAGCTTGGGACAAGCATAGATTTGATCCAGACTTGAGTGCACTCGGTCAACCTCTTCTTGGAAGAGACTATTCAAAACTTGATACTATGTCGGCGCATTCTAACGAGCAGAGCCCAGTGCCTCTAGGAATTCCATGA 1722 0.4501 MPFIGTQLKCKACEKIVYPVDQLSADGTSYHKACFRCSQGTLKLSNYSSMEGVLYCKPHYGQLFKETGGFNKNFQSQQSVSTHGLHPKRCRLRNSENPSLLRLAFWRVPGEASSSGMESVSNLGNLILQLSAPISECLAHAPYAPPEGSNVSAKSLLESLLPRKILPQDSNFHATIRDFSLACALLSSSSFKPLTHDYSDLLSWIPDHLSRLASSAFYDFSKVYLTAFNDKNSKRVAELGLKCDFVPQDQRLMLELMPEVLLSLKDRIKESSIDKSDETDEFSAASARAPVGYAIVAAYQLRWFISQVHYPHLGKLCGLVIPSALTAVDHWSSEVKGQGMISFCHLAKNVDTTELCGYADVILDACCQNIATSDEIWCHVVETSVVLVTYVQRNNPRSPWYERILNEMLSHLERQPRNKERRIAWLEYVGPLFDGVALVLLAHFRRIFPLFFQWMHADDDGTLILVLKRTFTILRQTWIRDSPYIERLVEELVLVYKEAALRKTREEIREHTRQILILLQQSKGLQFQAAWDKHRFDPDLSALGQPLLGRDYSKLDTMSAHSNEQSPVPLGIP 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0033 573 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 34 74 - -
Lele03g0033 573 Coils Coil 501 521 - -
Lele03g0033 573 PANTHER OS06G0694100 PROTEIN 122 544 - -
Lele03g0033 573 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 3 35 - -
Lele03g0033 573 ProSiteProfiles LIM domain profile. 8 66 IPR001781 -
Lele03g0033 573 SMART lim_4 9 59 IPR001781 -
Lele03g0033 573 FunFam LIM domain and actin-binding 1 4 72 - -
Lele03g0033 573 Pfam LIM domain 10 63 IPR001781 -
Lele03g0033 573 Gene3D Cysteine Rich Protein 6 72 - -
Lele03g0033 573 SUPERFAMILY ARM repeat 319 530 IPR016024 -
Lele03g0033 573 CDD LIM1_SF3 6 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0033 Lele-ChrLele03 217395 224408 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele03g0033 LIM 8.5e-09 CL0167