Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0027 ATGACTGAGAGAGACCGTGCCGGCTCTGCCTCTCCCTCTCCCTCTCCTTCCTTCGAACCTCCCCACAATGGCGCCGCTGACTCCGAAGTCGTCGGTTCTTCCGACTTGGAACCCGTCGCAGGCGATGCCGACTTATCTGGCCTTGGAGACGGAAACGTTTTTGGTAGAGTGAAGGGCCCGTGGTCCCCGGAGGAGGATGCCGTTCTCAGTCGATTGGTTGGCGAGCTGGGGGCAAGGAATTGGAGCATGATCGCGCGAGAGATACCCGGTCGCTCCGGCAAGTCGTGCCGCCTCCGTTGGTGTAATCAACTTGACCCCGGTGTTAAACGCAAGCCCTTTACTGAAGAAGAAGATCGTATTATAGTTGCAGCCCATGCAATGCATGGAAACAAATGGGCAGCAATCGCTAGGCTTCTTCCAGGAAGAACAGATAATGCTATAAAAAATCACTGGAATTCTACACTTAAGCGCAGATGCTTGGATCTTGTAAGATACATACCAATGGGTGCTGGCATGGGGGAAGAGGGCAGCCATGAGGCCACTGACAAAATAAAGGCATCTTCCGAATCAGCAGGAGATATCAATTCATTGAATCCCACACAAATTAAGAATGTTGGGATGGATGGTGGTATTAATCAGCATGAAGATAATCCTCCAAGAAACAATGGTGCTGAAGTGGAGGAACATCCTACCCTGTGTCAACCTGTAGCACGTGTTAGTGCATTTAGTGTCTATAATCCTCCAAGCAGGCCAACAACTGGATCCGCATATTCGAGGATGCTCCCGATGCAGGGTCCTTTGATTCAATCGTCCAAAGTTGAAGTAGGAGCCTGCAAGCCATTTGAAGAAGTTGGGTGTGAGCCCATGGTTCCGGTGCAATGTGGTCATGGCTGCTGTTCTGCAAGTTCTCGTAAAAGCCATTCTCATGATTCGCTACTAGGTCCTGAGTTCATCGACTATTTGGAGCCGCCCTCCATTTCAAGTCATGAATTGATCTCTATAGCAACAGATTTGAACAATATTGCTTGGATCAAGAGTGGCCTAGATGCCAGATTAACCGAGAATGCGGCAAACTTGACGGCATCTCAAGGTGTTGCTACTGCATTTCAAAATGGCTTCTTTGAGGAGGGAGCGAGCAAGTTTGCGGGTGTGATGCAAGATATGCTATCAACGCAGATGTCCAGCCATCCATTTGCAATGCCTGCAGAGGTTTGA 1215 0.4955 MTERDRAGSASPSPSPSFEPPHNGAADSEVVGSSDLEPVAGDADLSGLGDGNVFGRVKGPWSPEEDAVLSRLVGELGARNWSMIAREIPGRSGKSCRLRWCNQLDPGVKRKPFTEEEDRIIVAAHAMHGNKWAAIARLLPGRTDNAIKNHWNSTLKRRCLDLVRYIPMGAGMGEEGSHEATDKIKASSESAGDINSLNPTQIKNVGMDGGINQHEDNPPRNNGAEVEEHPTLCQPVARVSAFSVYNPPSRPTTGSAYSRMLPMQGPLIQSSKVEVGACKPFEEVGCEPMVPVQCGHGCCSASSRKSHSHDSLLGPEFIDYLEPPSISSHELISIATDLNNIAWIKSGLDARLTENAANLTASQGVATAFQNGFFEEGASKFAGVMQDMLSTQMSSHPFAMPAEV 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0027 404 SUPERFAMILY Homeodomain-like 55 151 IPR009057 -
Lele03g0027 404 Gene3D - 57 109 - -
Lele03g0027 404 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 105 159 IPR017930 -
Lele03g0027 404 CDD SANT 112 155 IPR001005 -
Lele03g0027 404 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 104 IPR017930 -
Lele03g0027 404 FunFam MYB transcription factor 58 109 - -
Lele03g0027 404 SMART sant 57 106 IPR001005 -
Lele03g0027 404 SMART sant 109 157 IPR001005 -
Lele03g0027 404 Pfam Myb-like DNA-binding domain 110 154 IPR001005 -
Lele03g0027 404 Pfam Myb-like DNA-binding domain 58 104 IPR001005 -
Lele03g0027 404 MobiDBLite consensus disorder prediction 1 49 - -
Lele03g0027 404 ProSiteProfiles Myb-like domain profile. 105 155 IPR001005 -
Lele03g0027 404 ProSiteProfiles Myb-like domain profile. 58 104 IPR001005 -
Lele03g0027 404 FunFam Transcription factor MYB44 112 158 - -
Lele03g0027 404 CDD SANT 60 102 IPR001005 -
Lele03g0027 404 Gene3D - 112 158 - -
Lele03g0027 404 PANTHER MYB PROTEIN-RELATED 58 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0027 Lele-ChrLele03 188035 192267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0027 53 389 MYB Transcription Factor Family AT3G55730 49.008 3.56e-102 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele03g0027 Myb_DNA-binding 5.6e-14 CL0123