Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0014 ATGTATCGTAGAGGTGTGACAGCGGCAGAACAAACCGTCCGCTCCAAATTGGAGGCCGCCATTCGTCCTCCATTGTACAATTCTCAGATAGGCACTGTCTGCTTTGTGAAATCAACTTCAGGATATCACTTGTGGGGACCCCCATACAAATTTGACGCATTGATATGGGCAAAGGCGCACTGCTTTTGGTGTTTCTCGGCTCTGGGGATTCATAGCAACCCGCAAAAAGCTTTTTCAGTGCCCATAAATTACCGGCCGTTCGTTCGTGTCACAGGAGTAGTGAACTGCGACAACGGGTTTTCTGCAGTTTGGTGTGTGATTCTTCTGATCCATCTTTTTCTGATAAGGGATCAGGAGGTAGAGATCAGAAAAGGTTTTGATACATGTCTATCTAGTCTTTTCGCCATATTCAAGCTTACTTCTTGTATTGGGTTTTGTCGTTTCTCAGTTCACAGAACATCCTGGAAAGAGGAAGCGGTATTTCTCACTATCCCATCCACAACTTTCCAAAACATGGCGAATCGGTGGTGGGCTGGAAATATCGTGATGAGACCCACCGATCCCATGTCATCTTCTCCGCCACTCCAGCTCAGAAACCCAGAAGATGACCCCGGCGGATTGAATCGTATCGGGCCTAGACGAGAACAAGAATCCATGGACAACGCCACCTCAGCTAATAGCAGCAACAGCAACACAAACCCAAACGTTCAAAACACCATAGACGACGATAGCCGCGAAGCCAACGACCAGAACCCCGGGAGCCACGAAGCAGTTGAACCCGGCAGCAGTGGCCGCCGACCAAGGGGTCGCCCACCGGGGTCCAAAAACAAGCCGAAGCCCCCTATCGGTGTAACCAAAGAAACCCCAAACGCACTTCGAAGCCATGTGTTGGAAATTGGAAGCGGCAGCGATGTGGTTGAGAGCATAGCCACCTTCGCGAACCGCCGACACCGAGGGGTATGGGTGCTTAGTGGAAGCGGCATCGTGACCAATGTGACTCTCCGGCAACCGGGGGTACCTGGCGGGGTAGTTACGCTGAATGGAAGGTTCGAGATATTGTCATTGTCCGGGGCATTTCTACCAGCGCCTTCACCAGCGGGGGGCAGCGGGCTAACGGTGTATTTAGCTGGTGGACAGGGGCAGGTAGTTGGCGGTACGGTGGTGGGTTCTTTGGTGGCTACGGGGCCTGTGATGGTGATTGCGGCCACATTTGGAAGCGCTACTTATGAGAGGCTACCATTAGAGGAAGAGGCGGGAGGTGAGGGAACGCAGGTGGTGCAGCAGCAGTCAAGAAGTACAGGAACGGCGGCATCACAAGGTTTGGGGGAACAAGTTTCAATGGCCATGTACAATTTACCATCGAATGGTCAGATGCCCCACGACCTGTTTTGGGGCTCTCCACCCCGCCCTCCGCCCCCATCTTACTGA 1428 0.5273 MYRRGVTAAEQTVRSKLEAAIRPPLYNSQIGTVCFVKSTSGYHLWGPPYKFDALIWAKAHCFWCFSALGIHSNPQKAFSVPINYRPFVRVTGVVNCDNGFSAVWCVILLIHLFLIRDQEVEIRKGFDTCLSSLFAIFKLTSCIGFCRFSVHRTSWKEEAVFLTIPSTTFQNMANRWWAGNIVMRPTDPMSSSPPLQLRNPEDDPGGLNRIGPRREQESMDNATSANSSNSNTNPNVQNTIDDDSREANDQNPGSHEAVEPGSSGRRPRGRPPGSKNKPKPPIGVTKETPNALRSHVLEIGSGSDVVESIATFANRRHRGVWVLSGSGIVTNVTLRQPGVPGGVVTLNGRFEILSLSGAFLPAPSPAGGSGLTVYLAGGQGQVVGGTVVGSLVATGPVMVIAATFGSATYERLPLEEEAGGEGTQVVQQQSRSTGTAASQGLGEQVSMAMYNLPSNGQMPHDLFWGSPPRPPPPSY 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0014 475 CDD DUF296 293 376 IPR005175 -
Lele03g0014 475 FunFam AT-hook motif nuclear-localized protein 292 419 - -
Lele03g0014 475 SUPERFAMILY AF0104/ALDC/Ptd012-like 290 416 - -
Lele03g0014 475 MobiDBLite consensus disorder prediction 217 241 - -
Lele03g0014 475 Pfam Plants and Prokaryotes Conserved (PCC) domain 293 404 IPR005175 -
Lele03g0014 475 MobiDBLite consensus disorder prediction 185 290 - -
Lele03g0014 475 MobiDBLite consensus disorder prediction 422 440 - -
Lele03g0014 475 Gene3D - 292 429 - -
Lele03g0014 475 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 228 465 IPR014476 GO:0003680
Lele03g0014 475 MobiDBLite consensus disorder prediction 418 440 - -
Lele03g0014 475 ProSiteProfiles PPC domain profile profile. 289 426 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0014 Lele-ChrLele03 105395 108223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0014 172 475 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 52.322 5.18e-65 210