LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele03g0003	ATGGGTGAGCGGTCTACTCATTTTTATTTTCTGGGTTTCTGTGTTCTTGATGGGATCTGCTTCACTATGGGTTTCTCTCCTCCAAACACAACCGGGATTGACCCTTGCGAGTCTTCCAATGTTCCGTCTTCTTCCTATCTGGTTGCAGATCACTATTGTGACTACAAGCTCAAATTTAGGACCATTCTGAGAAAAATGATCTGGGAGCTCGGCTTCGCCTGCGTTGCCCTGCCTCGCCGCCGGCTAAGCTCCGGTAAAAACGACGGCGACGGATATACAAAGACGAATCTAGAGCACAGCAAGGCGTGGTTGCTTGCGGAGTCTGGTGGGTGTGGAGAAGAGGTGACGAATGCTGACCCACAATCTGTTCCCTCGTCTTTCCGTTTCAGTTTCTGTTCTCAGGTTGAGCTCGACTCCTCGAGCATGAATTCTTCCGCTGCTGCAACCGTTCTGATGGTTAATCTGGACGATGGAATGCATAATTCTCGAGCTCGAGAGCTGAAATGTCGGAGGATGGAGTCCTTGGAAAAAAGCATATCCCCTGTAGCCAACACTTTGATCAGGTTCAACTACGGCGAAATTCTATCTGCTACTCGCAATTTCTCCAAAGGTAAAATTGGTCGGTTGTTCTTGCTAAACTCGAATATTATTCCAGGCAGAGAATTGGGCAGAGGGGCCTTGAGCTGTGTATTTAGGGGTAGAGTTGGGCTTTTGAGGACTGCTGTAGCAATCAAACGATTGGACAAGGAAGACAAGGAATCTGCAAAGGCTTTCTGTAAAGAACTGAGGATTGCCAGTTCTCTTCATAACCCAAACATTGTTCCCCTTGTGGGTTTTTGTATTGACCAGGAGGAGGGTTTATTTCTGGTGTACAAATATGTATCCGGGGGCAGCCTGGAGCACCATTTGCATGAAAGGAAGTGTGTGAAGGGTGGTTCACCACTTCCCTGGTCCGTGAGGTATAAAGTCGCGATTGGAATTGCAGAAGCCGTGGCTTATCTGCATAACGGAACTGAAAGATGCGTTGTTCACAGAGACATTAAACCCTCAAACATTCTCCTTTCATCTAAAAAGACTCCCAAGTTATGCGATTTTGGATTAGCTACATGGGCTTCTGCACCCTCAGTTCCTTTCCTCTGCAAAACAGTCAAGGGAACATTTGGGTATTTGGCTCCCGAGTATTTCCAACATGGAAAAGTATCTGATAAGACTGATGTTTATGCTTTCGGAGTTGTTTTATTAGAACTCATAACTGGCCGGAAGGCAATAGAAGCAAAAAGGCCCCCAGGAGAGGAGAACTTGGTCTTATGGGCTAAACCCTTGCTACAGAAAGGGAAGGGATCCATTGAAGAGTTGCTGGATCCTCTACTCAAGTGCAGTTTGAGATTCTCAAATCAGATGGCTCAGATGATAGAAGCAGCAGCTGTTTGTGTTACAAATGAAGAATATCGGAGACCTGGAATACAAGAGATTATTGCAATACTGAGAGGTCAAGAAGAACGTGTCTTGCCTAAAAGGAAGAAGTCTGGTCTTCTTGGGAATGGGTTGGTAGTTGATTGCTACCCTCAACTACAAAAAACAAATAACGAGATGAAAAGACACTTGGCTCTGGCAATGCTTGGAGTTCCAGAGTTTGAGGATGATGATTTTCTACATGGCCGTTGTAACACAAGCTTTAAACATGTTGGTTTTTCCTAG	1698	0.4552	MGERSTHFYFLGFCVLDGICFTMGFSPPNTTGIDPCESSNVPSSSYLVADHYCDYKLKFRTILRKMIWELGFACVALPRRRLSSGKNDGDGYTKTNLEHSKAWLLAESGGCGEEVTNADPQSVPSSFRFSFCSQVELDSSSMNSSAAATVLMVNLDDGMHNSRARELKCRRMESLEKSISPVANTLIRFNYGEILSATRNFSKGKIGRLFLLNSNIIPGRELGRGALSCVFRGRVGLLRTAVAIKRLDKEDKESAKAFCKELRIASSLHNPNIVPLVGFCIDQEEGLFLVYKYVSGGSLEHHLHERKCVKGGSPLPWSVRYKVAIGIAEAVAYLHNGTERCVVHRDIKPSNILLSSKKTPKLCDFGLATWASAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKAIEAKRPPGEENLVLWAKPLLQKGKGSIEELLDPLLKCSLRFSNQMAQMIEAAAVCVTNEEYRRPGIQEIIAILRGQEERVLPKRKKSGLLGNGLVVDCYPQLQKTNNEMKRHLALAMLGVPEFEDDDFLHGRCNTSFKHVGFS	565

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele03g0003	565	Pfam	Protein kinase domain	220	492	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele03g0003	565	SUPERFAMILY	Protein kinase-like (PK-like)	208	500	IPR011009	-
	Lele03g0003	565	ProSiteProfiles	Protein kinase domain profile.	216	503	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele03g0003	565	SMART	serkin_6	216	494	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele03g0003	565	FunFam	probable serine/threonine-protein kinase PBL7	162	293	-	-
	Lele03g0003	565	Gene3D	Phosphorylase Kinase; domain 1	182	293	-	-
	Lele03g0003	565	FunFam	Putative receptor-like serine/threonine-protein kinase	294	510	-	-
	Lele03g0003	565	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	342	354	IPR008271	GO:0004672\|GO:0006468
	Lele03g0003	565	Gene3D	Transferase(Phosphotransferase) domain 1	294	509	-	-
	Lele03g0003	565	PANTHER	OS08G0249100 PROTEIN	152	508	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele03g0003	Lele-ChrLele03	10099	13786	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele03g0003	189	539	Trihelix Transcription Factor Family	AT1G70460	38.655	3.66e-64	221

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VI	Lele03g0003		Pkinase	1.1e-43	CL0016

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