Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0003 ATGGGTGAGCGGTCTACTCATTTTTATTTTCTGGGTTTCTGTGTTCTTGATGGGATCTGCTTCACTATGGGTTTCTCTCCTCCAAACACAACCGGGATTGACCCTTGCGAGTCTTCCAATGTTCCGTCTTCTTCCTATCTGGTTGCAGATCACTATTGTGACTACAAGCTCAAATTTAGGACCATTCTGAGAAAAATGATCTGGGAGCTCGGCTTCGCCTGCGTTGCCCTGCCTCGCCGCCGGCTAAGCTCCGGTAAAAACGACGGCGACGGATATACAAAGACGAATCTAGAGCACAGCAAGGCGTGGTTGCTTGCGGAGTCTGGTGGGTGTGGAGAAGAGGTGACGAATGCTGACCCACAATCTGTTCCCTCGTCTTTCCGTTTCAGTTTCTGTTCTCAGGTTGAGCTCGACTCCTCGAGCATGAATTCTTCCGCTGCTGCAACCGTTCTGATGGTTAATCTGGACGATGGAATGCATAATTCTCGAGCTCGAGAGCTGAAATGTCGGAGGATGGAGTCCTTGGAAAAAAGCATATCCCCTGTAGCCAACACTTTGATCAGGTTCAACTACGGCGAAATTCTATCTGCTACTCGCAATTTCTCCAAAGGTAAAATTGGTCGGTTGTTCTTGCTAAACTCGAATATTATTCCAGGCAGAGAATTGGGCAGAGGGGCCTTGAGCTGTGTATTTAGGGGTAGAGTTGGGCTTTTGAGGACTGCTGTAGCAATCAAACGATTGGACAAGGAAGACAAGGAATCTGCAAAGGCTTTCTGTAAAGAACTGAGGATTGCCAGTTCTCTTCATAACCCAAACATTGTTCCCCTTGTGGGTTTTTGTATTGACCAGGAGGAGGGTTTATTTCTGGTGTACAAATATGTATCCGGGGGCAGCCTGGAGCACCATTTGCATGAAAGGAAGTGTGTGAAGGGTGGTTCACCACTTCCCTGGTCCGTGAGGTATAAAGTCGCGATTGGAATTGCAGAAGCCGTGGCTTATCTGCATAACGGAACTGAAAGATGCGTTGTTCACAGAGACATTAAACCCTCAAACATTCTCCTTTCATCTAAAAAGACTCCCAAGTTATGCGATTTTGGATTAGCTACATGGGCTTCTGCACCCTCAGTTCCTTTCCTCTGCAAAACAGTCAAGGGAACATTTGGGTATTTGGCTCCCGAGTATTTCCAACATGGAAAAGTATCTGATAAGACTGATGTTTATGCTTTCGGAGTTGTTTTATTAGAACTCATAACTGGCCGGAAGGCAATAGAAGCAAAAAGGCCCCCAGGAGAGGAGAACTTGGTCTTATGGGCTAAACCCTTGCTACAGAAAGGGAAGGGATCCATTGAAGAGTTGCTGGATCCTCTACTCAAGTGCAGTTTGAGATTCTCAAATCAGATGGCTCAGATGATAGAAGCAGCAGCTGTTTGTGTTACAAATGAAGAATATCGGAGACCTGGAATACAAGAGATTATTGCAATACTGAGAGGTCAAGAAGAACGTGTCTTGCCTAAAAGGAAGAAGTCTGGTCTTCTTGGGAATGGGTTGGTAGTTGATTGCTACCCTCAACTACAAAAAACAAATAACGAGATGAAAAGACACTTGGCTCTGGCAATGCTTGGAGTTCCAGAGTTTGAGGATGATGATTTTCTACATGGCCGTTGTAACACAAGCTTTAAACATGTTGGTTTTTCCTAG 1698 0.4552 MGERSTHFYFLGFCVLDGICFTMGFSPPNTTGIDPCESSNVPSSSYLVADHYCDYKLKFRTILRKMIWELGFACVALPRRRLSSGKNDGDGYTKTNLEHSKAWLLAESGGCGEEVTNADPQSVPSSFRFSFCSQVELDSSSMNSSAAATVLMVNLDDGMHNSRARELKCRRMESLEKSISPVANTLIRFNYGEILSATRNFSKGKIGRLFLLNSNIIPGRELGRGALSCVFRGRVGLLRTAVAIKRLDKEDKESAKAFCKELRIASSLHNPNIVPLVGFCIDQEEGLFLVYKYVSGGSLEHHLHERKCVKGGSPLPWSVRYKVAIGIAEAVAYLHNGTERCVVHRDIKPSNILLSSKKTPKLCDFGLATWASAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKAIEAKRPPGEENLVLWAKPLLQKGKGSIEELLDPLLKCSLRFSNQMAQMIEAAAVCVTNEEYRRPGIQEIIAILRGQEERVLPKRKKSGLLGNGLVVDCYPQLQKTNNEMKRHLALAMLGVPEFEDDDFLHGRCNTSFKHVGFS 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0003 565 Pfam Protein kinase domain 220 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0003 565 SUPERFAMILY Protein kinase-like (PK-like) 208 500 IPR011009 -
Lele03g0003 565 ProSiteProfiles Protein kinase domain profile. 216 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0003 565 SMART serkin_6 216 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0003 565 FunFam probable serine/threonine-protein kinase PBL7 162 293 - -
Lele03g0003 565 Gene3D Phosphorylase Kinase; domain 1 182 293 - -
Lele03g0003 565 FunFam Putative receptor-like serine/threonine-protein kinase 294 510 - -
Lele03g0003 565 ProSitePatterns Serine/Threonine protein kinases active-site signature. 342 354 IPR008271 GO:0004672|GO:0006468
Lele03g0003 565 Gene3D Transferase(Phosphotransferase) domain 1 294 509 - -
Lele03g0003 565 PANTHER OS08G0249100 PROTEIN 152 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0003 Lele-ChrLele03 10099 13786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0003 189 539 Trihelix Transcription Factor Family AT1G70460 38.655 3.66e-64 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele03g0003 Pkinase 1.1e-43 CL0016