Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g2068 ATGAAGAACAATCTGGCATTTCTTGCAAGAACTGTTGCAACGAAATTTCATAGCCCATCTTCATTGCGAATTTATTGTTCATCCTCCTCAGCGTCTTCTCCTCCTTCCAGCAATAAACTTTTTGTCGGAGGGTTGTCATGGTCCGTGGATGAGAAGTCACTCAAAGATGCTTTCTCTTCATTTGGTGAAGTCAACGAAGTGAGGATAGCATATGATAAAGACAGTGGTAGGTCTAGAGGGTTTGGATTTGTCATATTTTCGGATGAAGACCATGCCAAAACTGCAAAAGACGCCATGGATGGCAAGGGACTCTTAGGAAGACCCTTGAGAATAAATTTTGCTCTTGAGAAGGTGCGTGGGGGACCTGTTGTAGTTCCTCGGATCTCAGATATTGGACACATAAATAGGCGCAGCAGTTGGTCTAAAACTCGATGA 435 0.4345 MKNNLAFLARTVATKFHSPSSLRIYCSSSSASSPPSSNKLFVGGLSWSVDEKSLKDAFSSFGEVNEVRIAYDKDSGRSRGFGFVIFSDEDHAKTAKDAMDGKGLLGRPLRINFALEKVRGGPVVVPRISDIGHINRRSSWSKTR 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g2068 144 Gene3D - 15 119 IPR012677 -
Lele02g2068 144 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 38 116 IPR000504 GO:0003723
Lele02g2068 144 SUPERFAMILY RNA-binding domain, RBD 30 124 IPR035979 GO:0003676
Lele02g2068 144 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 40 110 IPR000504 GO:0003723
Lele02g2068 144 SMART rrm1_1 39 112 IPR000504 GO:0003723
Lele02g2068 144 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 21 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g2068 Lele-ChrLele02 24866523 24869695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g2068 30 117 C2H2 Transcription Factor Family AT2G19380 36.364 5.08e-13 63.2