Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g2062 ATGTTACCCAGATTCGGGTTTCCACTTCTCTTCTTGTTATTTTTCTCTCTCTGTCTCAATGCAGAATCCAAGTGTAAGAAAGGATGTGACTTGGCTCTTGCCTCCTACTACATTTGGGTCGGCTATCCAAATATCACGTACTTTCCGCAGATCATGAGATCTCCAGTTCTTCAAAGAACTCAAGATATCATCGGCTATAACAAAGACCAATTATTAAGCGAAACCTATGTCCAAAGCTTAGCTCGAGTGAAAGTTCCGTTCCCTTGCGATTGCATCGATGGCGAATATCTAGGTTATGTATTCAAGTACCAAATTCAGAAAGAAGACACCTATAAGTTGGTTGCGAATCAGAATTATGCCAATTTGACCTCCGTTTCGATGTTGGAGATTGCGAATAGCTATTCACCGGAGAATATTCCGGATAATGGAACGCTCAATGTGACGGTGAAATGTTCGTGTGGGGATAGGCACGTTTCGAAAGAGTATGGGTTGTTCGTCACTTACCCTCTTAGAGCTGAGGATTCTTTGGATTCCATTGCGAACCAGACGAAGCTTGATCGATCATTGCTTCAGAGGTATAATCCTGGTGTTGATTTCAACAAAGGGAGTGGTGTGGTGTTTATCCCGGGAAAAGAACAAAAGGTACGCTTGATTGGATATTGCGTTAAGAGGCACTTTCTTTTCCTTGTATATGAATATATTGATAATGGAAACTTAAGCCAACACCTACGAGATTCAGGGAGAGAACCCCTGTCATGGTCAATGCGAGTACAAATTGCTCTGGATTCGGCCAGAGGTCTTGAATACATTCATGAGCATACGGTTCCTGTATATGTTCATCGTGACATAAAGCCAGCTAATATATTGATAGACAGAAACTTCTGTGCAAAGGTTGCAGATTTTGGGTTAACCAAGCTCATTGAAGTGGGAAATTCACCACATCTCTCTGAAAACATTGCAGGCACATTTGGTTATATTCCACCCCAGAATGATGGTGGTGTTAAAACCGATGTCTATGCTTTCGGAGTTGTTCTCTATGAAATTATATCTGCTAAAGAAGCTGTGCATATTGACTATGAAGCTGGTTCTGAAGCAAAACCCCTTGTCTCTTTGTTTGAAGAAGCTCTTAAGCAGCCTAATCCTGAAGAACATCTTCTAAAGCTTGTTGATCCTAGGCTTGAAGGCGAATATTCATTCGATTCAGTTTACAAGATGGTCCAACTAGCCAAGGCTTGCTCAGAGGAAAAACCAGACCGACGGCCTAGTATGAGATCTGTTGTGGTGGCTCTAATGACACTCTCTTCTTCTATTGAATAG 1317 0.4176 MLPRFGFPLLFLLFFSLCLNAESKCKKGCDLALASYYIWVGYPNITYFPQIMRSPVLQRTQDIIGYNKDQLLSETYVQSLARVKVPFPCDCIDGEYLGYVFKYQIQKEDTYKLVANQNYANLTSVSMLEIANSYSPENIPDNGTLNVTVKCSCGDRHVSKEYGLFVTYPLRAEDSLDSIANQTKLDRSLLQRYNPGVDFNKGSGVVFIPGKEQKVRLIGYCVKRHFLFLVYEYIDNGNLSQHLRDSGREPLSWSMRVQIALDSARGLEYIHEHTVPVYVHRDIKPANILIDRNFCAKVADFGLTKLIEVGNSPHLSENIAGTFGYIPPQNDGGVKTDVYAFGVVLYEIISAKEAVHIDYEAGSEAKPLVSLFEEALKQPNPEEHLLKLVDPRLEGEYSFDSVYKMVQLAKACSEEKPDRRPSMRSVVVALMTLSSSIE 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g2062 438 Pfam Protein tyrosine and serine/threonine kinase 215 429 IPR001245 GO:0004672|GO:0006468
Lele02g2062 438 ProSiteProfiles Protein kinase domain profile. 119 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g2062 438 FunFam PTI1-like tyrosine-protein kinase 3 234 438 - -
Lele02g2062 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Lele02g2062 438 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 215 437 IPR044812 GO:0019199|GO:0045087
Lele02g2062 438 SMART serkin_6 134 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g2062 438 Gene3D Transferase(Phosphotransferase) domain 1 212 438 - -
Lele02g2062 438 SUPERFAMILY Protein kinase-like (PK-like) 215 427 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g2062 Lele-ChrLele02 24685505 24696279 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g2062 215 436 Receptor kinase-like Gene Family AT3G21630 65.778 1.04e-89 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele02g2062 PK_Tyr_Ser-Thr 3.2e-30 CL0016