Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g2037 ATGGACGTATTGCCGGTGATGGTTGGAAAATTTGAAGAATTTAGTTACTTGTACATCAAGCCAGATAAGTCCGATGACCGCTATTATAAGTTTGCCTTCTGTTTTGAACTTAAGTATGCGTGCATGCACGTGTATGAAGTTTTACCAGATTCATGTTGAGTTGGAGGCCAAACCATGAAGGCGGCTCTGAAACCCAGTAGCCACCCCTCCATCAGATTCTCTTCCTTTCCTGATCAACCTAAAGTTTTCTTCTCTTCAGTTTTCATAGACCCTTCAATTTCAGATTCATTATTCTTTGAACTTTTTAATTTCGTGATTTTACTTGAGGTCAGAGATATGGCGAAAGAAGGTGCTCTTCTCGTGAGTTCGAAAGCGGAGTTGAAACGGAAGGAGAAGCAACAGAAGAAGGCCAAGTCTGGCGGCTTTGAGTCCTTGGGTCTTAGCCCCAACGTGTACAGAGGAATCAAGCGCAAAGGTTATAAGGTGCCGACTCCAATTCAGAGGAAGACGATACCAATCATTCTTTCTGGCGCTGATGTGGTTGCCATGGCTCGTACTGGGTCTGGTAAAACCGCTGCGTTTCTCGTCCCCATGATTCAGCGTTTGAATCAGCATCTTCCTCAGGGTGGTGTTAGAGCTCTCATTTTGTCCCCTACAAGAGACTTGGCGCTTCAGACTTTGAAGTTCACCAAAGAGCTTGGTCACTTCACAGATCTTCGTGTTAGTTTATTAGTTGGAGGTGATAGTATGGAAAGTCAGTTTGTGGAGTTAGCTCAAAATCCTGACATTATAATTGCAACGCCTGGTAGGCTTATGCACCATTTGTCTGAAATTGATGACATGTCTCTGCGCACTGTGGAATATGTTGTTTTTGATGAGGCAGATTGTTTATTTGGCATGGGTTTTGCTCAGCAATTGCATCAAATTCTTACGCAGCTAGGTGAGAACCGTCAGACCTTGCTTTTCAGTGCTACATTGCCTAGTGCCCTTGCTGAATTTGCAAAGGCTGGCCTGCGTGACCCTCAGCTTGTTCGTCTGGATTTGGAAACTAAAATTAGCCCTGACCTGAAGGTTGCCTTTTTCACCTTGAGGCAGGAAGAAAAATATGCAGCATTATTGTATTTGATTAGGGAGAAAATTAGTTCTGATCAGCAGACACTAATATTTGTATCCACCAAACATCACGTGGAATTTCTGAACACATTGTTTAGGGAAGATGGTATTGAGCCATCTGTATGTTATGGTGACATGGATCAAGATGCTCGCAAAATTCACATATCAAGGTTCAGGTCAAGAAAGACAATGTTGTTGATTGTGACAGATGTTGCTGCTCGGGGCATAGATATTCCATTACTTGATAATGTTATCAATTGGGACTTCCCCCCCAAGCCTAAAATATTTGTTCATCGAGTTGGAAGGGCTGCAAGAGCAGGTCGCACTGGTACTGCCTTTTCTTTTGTGACTTCGGAGGATATGCCATACCTTTTGGATCTTCATTTGTTCCTTTCAAGGCCAATCAGAGCTGCTCCAACTGAAGAAGAGGTTCTGCAGGATATGAATGGAGCATTTTCCAAAATTGACCAGGCAATAGCAAAGGGAGAAACTGTTTATGGTCGTTTCCCTCAAAATGTCTTAGACCTTGTTTCAGACAGAGTTCGTGAAACCATTGATGCTTCTGTTGAGCTACAATCATTGCAGAAGACCTGTCAAAATGCATTTCGTTTATATTCGAAGACAAAACCCTTACCTTCAAAGGAGTCTATTAGAAGAGTAAAAGATTTACCACGTGAGGGGTTGCATCCAATTTTCAAGAATGTATTGGAAACAGGGGAATTAATGGCACTTGCTTTTTCAGAGCACTTGAAAAAGTTTAGGCCAAAGCAGACTGTTTTGGAGGCTGAAGGTGAAGCAGCTAAATCAAAGCATCTACAGGGACTTGCTGGTCAATGGGTTGATGTGATGAAGAAAAAAAGAGCCATTCATGAGAATATTATAAATTTAGTCCACGAGCAGCGCTCTAAGAATAACACAAAAGAGGGGGAAATTGAATTGGATATCACTCCTTCTGAGGAGAAGGGCAAAAAAGCAGTGTCTGGTTCTAAGAGAAAGCCACATAGTTTCAAGGATGAGGAATACTACATAAGTTCTATACCCCAAAATCATCATATGGAAGCAGGCCTTTCAGTCAGGGCTAAAGAAGACTTTTCTTCAAACAGATTGGAATCAGCTGTTCTCGATCTAGTTGCAGATGACGGTGCTGGAATTCAGAAACAAAAGTCAGTATATCATTGGGATAAGAAAAGTAAAAAGTATATCAAGCTAAACAATGGTGAACGTGTTGCTGCTAATGGGAAGATAAAGACAGAGGGTGGTGCAAAAGTGAAGGCCAACAAAACTGGTATATATAAGAAGTGGAAAGAACGCTCACACAATAAGATAGCTCTTAAGGGGATGGATAATGAAGGTGATTCTTATGGATCCACGAGTTCGGCAGGGCATTCTCGAGGTGGTCCCCGGAAATTTAAGGGCGGCAAGAAGCAGCATTCAGTGCCAAATGCTCATGTGCGTTCAGAGATCAAAGACTTAGATCAAATTCGAAAGGAGAGGCAGCAGAAAGCAAACAGACTTTCATATCTGAAGAGCCAGTCTGCTAAAAGGGGTAAAAAATTTGGTAAAAATGGGAAGAAAGGAAAGGGTGGTGGCGGTGGACATGGTGGAAAGAAAGGAAAGGGAAGGTAG 2739 0.4235 MDVLPVMVGKFEEFSYLYIKPDKSDDRYYKFAFCFELKYACMHVYEVLPDSCXVGGQTMKAALKPSSHPSIRFSSFPDQPKVFFSSVFIDPSISDSLFFELFNFVILLEVRDMAKEGALLVSSKAELKRKEKQQKKAKSGGFESLGLSPNVYRGIKRKGYKVPTPIQRKTIPIILSGADVVAMARTGSGKTAAFLVPMIQRLNQHLPQGGVRALILSPTRDLALQTLKFTKELGHFTDLRVSLLVGGDSMESQFVELAQNPDIIIATPGRLMHHLSEIDDMSLRTVEYVVFDEADCLFGMGFAQQLHQILTQLGENRQTLLFSATLPSALAEFAKAGLRDPQLVRLDLETKISPDLKVAFFTLRQEEKYAALLYLIREKISSDQQTLIFVSTKHHVEFLNTLFREDGIEPSVCYGDMDQDARKIHISRFRSRKTMLLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGTAFSFVTSEDMPYLLDLHLFLSRPIRAAPTEEEVLQDMNGAFSKIDQAIAKGETVYGRFPQNVLDLVSDRVRETIDASVELQSLQKTCQNAFRLYSKTKPLPSKESIRRVKDLPREGLHPIFKNVLETGELMALAFSEHLKKFRPKQTVLEAEGEAAKSKHLQGLAGQWVDVMKKKRAIHENIINLVHEQRSKNNTKEGEIELDITPSEEKGKKAVSGSKRKPHSFKDEEYYISSIPQNHHMEAGLSVRAKEDFSSNRLESAVLDLVADDGAGIQKQKSVYHWDKKSKKYIKLNNGERVAANGKIKTEGGAKVKANKTGIYKKWKERSHNKIALKGMDNEGDSYGSTSSAGHSRGGPRKFKGGKKQHSVPNAHVRSEIKDLDQIRKERQQKANRLSYLKSQSAKRGKKFGKNGKKGKGGGGGHGGKKGKGR 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g2037 912 Gene3D - 358 587 IPR027417 -
Lele02g2037 912 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 140 168 IPR014014 GO:0003724
Lele02g2037 912 CDD DEADc_DDX54 140 345 - -
Lele02g2037 912 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 125 811 - -
Lele02g2037 912 Coils Coil 862 882 - -
Lele02g2037 912 MobiDBLite consensus disorder prediction 885 912 - -
Lele02g2037 912 SMART helicmild6 397 478 IPR001650 -
Lele02g2037 912 MobiDBLite consensus disorder prediction 851 874 - -
Lele02g2037 912 Gene3D - 108 347 IPR027417 -
Lele02g2037 912 Pfam DEAD/DEAH box helicase 164 330 IPR011545 GO:0003676|GO:0005524
Lele02g2037 912 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 210 496 IPR027417 -
Lele02g2037 912 Pfam DBP10CT (NUC160) domain 746 807 IPR012541 GO:0003723|GO:0003724|GO:0005524|GO:0005634
Lele02g2037 912 Pfam Helicase conserved C-terminal domain 367 478 IPR001650 -
Lele02g2037 912 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 368 517 IPR001650 -
Lele02g2037 912 CDD SF2_C_DEAD 363 487 - -
Lele02g2037 912 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 171 344 IPR014001 -
Lele02g2037 912 SMART DBP10CT_2 746 808 IPR012541 GO:0003723|GO:0003724|GO:0005524|GO:0005634
Lele02g2037 912 SMART ultradead3 159 359 IPR014001 -
Lele02g2037 912 MobiDBLite consensus disorder prediction 813 912 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g2037 Lele-ChrLele02 24176259 24184152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g2037 142 511 Eukaryotic Initiation Factors Gene Family AT1G72730 33.333 2.14e-59 207