Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g2024 ATGCAAATACAAGGTTCAAGCCAAGCTCAGCCATTTGCTTCATCACCATTAGTGAACAGTGAGATGGCAATGCCGTCATATGAATTAAGTTTATCATCACTTGGTCAAATTCTTTGTTCAGGGACTAGTGCTCCCGTTCAAGCCGATATGGATGGATCTAACCCTAGAGCTGCAGATCATAATGTGCTTCAAGCTTCACAGGTTGAAGTTAGAGGCAGTGGTGTCTCAGTTCCTATCGAAAGATCATATGATGATGATGATGGATATAATTGGCGAAAATATGGACAGAAGCAAGTTAAAGGGTGTGAATTTCCGCGCTCCTTCTACAAATGTACACATCCCAACTGTGGAGCGAAAAAAAAAGCTTGA 369 0.4173 MQIQGSSQAQPFASSPLVNSEMAMPSYELSLSSLGQILCSGTSAPVQADMDGSNPRAADHNVLQASQVEVRGSGVSVPIERSYDDDDGYNWRKYGQKQVKGCEFPRSFYKCTHPNCGAKKKA 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g2024 122 SMART WRKY_cls 85 122 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele02g2024 122 ProSiteProfiles WRKY domain profile. 86 122 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele02g2024 122 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 62 121 IPR044810 GO:0003700
Lele02g2024 122 SUPERFAMILY WRKY DNA-binding domain 84 121 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele02g2024 122 Pfam WRKY DNA -binding domain 86 121 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele02g2024 122 Gene3D WRKY domain 75 122 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g2024 Lele-ChrLele02 24007685 24008053 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g2024 63 120 WRKY Transcription Factor Family AT4G26640 63.793 2.18e-19 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele02g2024 WRKY 9.8e-16 CL0274