Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g2012 ATGGCAATGCCGTCATATGAATTAAGTTTATCATCACTTGGTCAAATTCTTTGTTCAGGGGCTAGTGCTCCCGTTCAAGCAGATATGGATGGATCTAACCCTAGAGTTGCAGATAATAATGTGCTTCAAGCGTCACAGGTGGAAGTTAGAGGCAGTGGTGTCGCAGTTCCTATGGAAAGATCATATGATGATGATGATGATGATGGATATAGTTGGCGGAAGTATAGACAGAAGCAAGTTAAAGGGAGTGAATTTCCACGCTCCTTCTACAAATGTACACATCTCAACTGTGGAGCCAAAAAAAAGCTTGAATTCTCTAATGATTGGCGAATAATTGAGATAATTTACAAGGGATCACATTGTCATCCTAGACCAAGGGGGTCATCTCAAATAGATTCACTTTGGATTTGA 411 0.4039 MAMPSYELSLSSLGQILCSGASAPVQADMDGSNPRVADNNVLQASQVEVRGSGVAVPMERSYDDDDDDGYSWRKYRQKQVKGSEFPRSFYKCTHLNCGAKKKLEFSNDWRIIEIIYKGSHCHPRPRGSSQIDSLWI 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g2012 136 ProSiteProfiles WRKY domain profile. 61 125 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele02g2012 136 SUPERFAMILY WRKY DNA-binding domain 66 125 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele02g2012 136 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 45 128 IPR044810 GO:0003700
Lele02g2012 136 Pfam WRKY DNA -binding domain 67 122 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele02g2012 136 Gene3D WRKY domain 51 126 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele02g2012 136 FunFam WRKY transcription factor 55 126 - -
Lele02g2012 136 SMART WRKY_cls 66 124 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g2012 Lele-ChrLele02 23878644 23879054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g2012 67 129 WRKY Transcription Factor Family AT4G26640 46.875 1.62e-12 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele02g2012 WRKY 3e-21 CL0274