Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1981 ATGATCCCGGCACGTCACAGTTACAGCGCGTCCTTCTTCAAACTACAGAGTGCTCATTCATCTATACCTTTTAAATTCTCCCATCCTCACTCCTTCCTGACTCACTCAATGGCCGACCGAGTTCACCCGCACGACTCACCTCCCGTTTCCGGCGAATCCCAGCCCGCATCGTCTCCGGAGCACGGCGTCCCCAGGAAACCCACTCCACCTGCGCCGGCGAAGCCTGTCTCGCCTCCACAGGCTGGAACCTACGTCATCCAGATCCCCAAGGACCAAGTCTACCGCGTTCCTCCACCGGAGAATGCTCGCCGCCAGAGCCAGTACGGTCGCCGGAAGAGCCGCCGTAGTTCTTGCTGCTGCTGCCTGTGCTGGCTGATCGGTCTCATCTTCATCCTCATCGTCCTCCTCGGTATTGCCGCCGGCGTCATGTACCTCGTTTTCCGTCCCAAGGCGCCAGACTACACAATCAACAGCATTGCCGTCAAAGGAGTAAACCTCGCATCGGTAGCAAACGCCTCATCTTCGATCTCGCCGGAGTTCGACGTCGGCGTTCGCGCCAATAACCCTAACAAGAAGATCGGGATTTACTACGAGAAGGATAGCTCTGTAGAAGTGTTCTACAAGGAAGTGTTGCTATGTAACGGCGCGTGGCCGGCTTTTTACCAGCCGTCAAATAACGTCACGGTGTTTCAAACGGTGTTAAAGGGTTCCAACATTGAGCTGACGACCACCGATGCGAGGGCTTTAGTGGATGCGCAGAGCAAACAAAGAGTGCCGTTAACGTTGAAACTGCGGGCGCCGGTGAAGATCAAGGTCGGTGCTGTTAAGACGTGGAAGATTACTGTTAAAGTTGACTGTGATGTAACGGTGGACAATCTAACGGCGAAGGCTAAGGTGGTTTCAAAGGATTGCAATTACGGTGTGGATCTATGGTGA 936 0.5438 MIPARHSYSASFFKLQSAHSSIPFKFSHPHSFLTHSMADRVHPHDSPPVSGESQPASSPEHGVPRKPTPPAPAKPVSPPQAGTYVIQIPKDQVYRVPPPENARRQSQYGRRKSRRSSCCCCLCWLIGLIFILIVLLGIAAGVMYLVFRPKAPDYTINSIAVKGVNLASVANASSSISPEFDVGVRANNPNKKIGIYYEKDSSVEVFYKEVLLCNGAWPAFYQPSNNVTVFQTVLKGSNIELTTTDARALVDAQSKQRVPLTLKLRAPVKIKVGAVKTWKITVKVDCDVTVDNLTAKAKVVSKDCNYGVDLW 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1981 311 Pfam Late embryogenesis abundant protein 184 286 IPR004864 -
Lele02g1981 311 MobiDBLite consensus disorder prediction 62 77 - -
Lele02g1981 311 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 62 294 - -
Lele02g1981 311 MobiDBLite consensus disorder prediction 38 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1981 Lele-ChrLele02 23449674 23452589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1981 76 311 EF-hand Containing Proteins AT5G21130 45.763 8.74e-74 227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g2117 26 24203845 24208929 Lele02g1981 02 23449674 23452589 CCT
Lele27g0013 27 123736 128497 Lele02g1981 02 23449674 23452589 CCT
Lele28g2115 28 24015727 24019868 Lele02g1981 02 23449674 23452589 CCT
Lele25g2060 25 27920710 27923954 Lele02g1981 02 23449674 23452589 CCT
Lele02g1981 02 23449674 23452589 Lele03g1614 03 10539437 10540264 hybridization
Lele02g1981 02 23449674 23452589 Lele04g1930 04 23800479 23801306 hybridization