Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1940 ATGGGCAGTGCACTAATGCTTTTGAAACTGGCTTTATTAGCCGCCTGCACGCTGGCCGCGGCGCCCTCGGAGCTGGCGGCAGATTGCCCTAGAAAGTGCGGGAACGTGGACATCCCTTATCCGTTCGGCATGAAGGAAGGCTGCTTCAAAGATCATGATTTTCAAATATTCTGCAACTATTCCTCTGGACACCCCATTCCATACCTAGCAAGACTAAGAAACAACACCCAGGTTCTCTACATCTATGGGAATACTAGTGAGATTCATGTCTCTATGCCTGTTTCTCATGTTTGCTATAATAACAAAAGAGACAACAATACGCTAGACTCTTTTACCTCTGGAAGATTTTGGGTGCCTTCCAAGTTCAGCATATCCAGTAAAAAGAACAAATTCAACGTAGTGGGGCCTGACTACGCCTTCGGTTACATCTATGACCGGAAAGAAAGAAGAATTCACGGCTGCGAGACGAGTTGTAGTGAGCAGAGTTCAGGGACGACGAATTATAGTGGATCCTGCTCCGGCGGCCGCAGTGGCTTCTGCCAGAATGATTTTGAGGAAGCCCTTACAAATTATTCTATTTCTATTTCTCTTTATTTCGATAGCCCAGATGTGCCTGAGGACAATAGCTGTGGTTCTGCATTTCTTGCGCAGAACGGGTCTTTCAACTTTTCCGACCACGACATCAAGAAGCTAAGAGAAAGTAAAAGATCCACGGTGGTTCTCAGTTGGGCTGTTGATAACAGGAGCTCATGTGGTGGAGCCTGCAAAGGTAACAATGCAGAATGCAAACAATCAGAAAGTGTCACTGGCTACTACTGCAAATGCAAACAAGGGTTCGAAGGCAACCCCTACGACAAAGGCGATGGCTGCAAAGATGTGGATGAGTGCCGCGACATCACCTTAAATAATTGCTTGCATAAGGAGCTTTGCAAAAATATGTATGGCGACTACACATGTTCTTGTCCACATGGACGAAAAGGCAATGGCCGGAATGATACTACTGGATCAGGATCAGGCTGCAGAACTCCGGACCATATCATGACAATTCCATTAGTTGTTACTATAGCTTTGTTGGTTGTCTTCACACTGGTCTCCATGTTCTGTTGGGCACGCAAGCAAAGAACTCTGAAACAACTAAGACAGAAAAACTTTGAGCAAAATGGAGGAAACTTCCTTCTACAACAACTCTCACAACAACAAAGATACACTGACAGAACCAGAATATTTACTAAAGTTGAGCTTAAGAATGCCACAGACAACTTCGATGAAACTAGAATTCTTGGTCGTGGAGCACAAGGAACAGTTTACAAGGGAATATTACCAAATAACACAGTTGTGGCCATTAAGAAGTCTAGAGTTGGAGGAGATCCTGAAAATATTAAAAGTTTTATCAATGAAGTGTTTGTGCTTTCACAAGTCAACCATAGACATGTGGTCAAACTTTTGGGATGTTGTCTTGAAAATGAAGTTCCTTTATTAGTATATGAGTTTGTTGATAATGGAACACTTCTTGACCACCTAGACCCGTCCAAAAATGAATGCCCTATCACATGGGAGACTCGTTTGAGAATAGCTACAGAAACTGCTGAGGCCATTTCATATTTACATTCTGCTGCTTCTATTCCGATTATTCATCGAGATATTAAATCTGCAAACATACTGTTAGACCACAATGATAGAGCAAAAGTGTCTGATTTCGGAGCTTCACGGCTTGTTCATCTTGATGAAGCTCAGGTCGCGACAGTAGTTCAAGGGACGATAGGGTATTTGGACCCGGAGTACCTTCAAACGGGCCAGTTGAATGAGAAGAGCGATGTTTATAGTTTTGGAATAGTGCTGGTGGAGCTACTTACTGGGAATAAAGCTTTTAAATTCAACACATTGGCTAAGCATTTCGTGTCTTCAATGAGTGAAGAACGCTTGTGGGAAATTCTTGATAAGCGAGTGCTGAATCAGAAGAAGAATGAAAAACAGTTGAAGGAAGTAGCCTTATTGGCAAGAAGATGCATTAGGCTTAATGGAGAAGAAAGGCCAACGATGAAGGAAGTAGCAATGGAGTTAGAAGGTTTAATGGCAATGGAAAAGCACCTTCAAGAGAAGGACCAGGATTTGATAATGGTAGAAGAAAGTGAATACTTACTGAGGCATTGCCCTAATAATGATGGATATGGAAGTACCAGTGCTAGTTTTTCAGATGCTAGTGGCTATGATAGTATGATACAAAAGCAAGCGACATTTGAGATTACAAGTGGGGGACGATGA 2262 0.4271 MGSALMLLKLALLAACTLAAAPSELAADCPRKCGNVDIPYPFGMKEGCFKDHDFQIFCNYSSGHPIPYLARLRNNTQVLYIYGNTSEIHVSMPVSHVCYNNKRDNNTLDSFTSGRFWVPSKFSISSKKNKFNVVGPDYAFGYIYDRKERRIHGCETSCSEQSSGTTNYSGSCSGGRSGFCQNDFEEALTNYSISISLYFDSPDVPEDNSCGSAFLAQNGSFNFSDHDIKKLRESKRSTVVLSWAVDNRSSCGGACKGNNAECKQSESVTGYYCKCKQGFEGNPYDKGDGCKDVDECRDITLNNCLHKELCKNMYGDYTCSCPHGRKGNGRNDTTGSGSGCRTPDHIMTIPLVVTIALLVVFTLVSMFCWARKQRTLKQLRQKNFEQNGGNFLLQQLSQQQRYTDRTRIFTKVELKNATDNFDETRILGRGAQGTVYKGILPNNTVVAIKKSRVGGDPENIKSFINEVFVLSQVNHRHVVKLLGCCLENEVPLLVYEFVDNGTLLDHLDPSKNECPITWETRLRIATETAEAISYLHSAASIPIIHRDIKSANILLDHNDRAKVSDFGASRLVHLDEAQVATVVQGTIGYLDPEYLQTGQLNEKSDVYSFGIVLVELLTGNKAFKFNTLAKHFVSSMSEERLWEILDKRVLNQKKNEKQLKEVALLARRCIRLNGEERPTMKEVAMELEGLMAMEKHLQEKDQDLIMVEESEYLLRHCPNNDGYGSTSASFSDASGYDSMIQKQATFEITSGGR 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1940 753 ProSiteProfiles EGF-like domain profile. 292 331 IPR000742 -
Lele02g1940 753 ProSitePatterns Serine/Threonine protein kinases active-site signature. 543 555 IPR008271 GO:0004672|GO:0006468
Lele02g1940 753 Pfam Wall-associated receptor kinase galacturonan-binding 29 90 IPR025287 GO:0030247
Lele02g1940 753 SMART egfca_6 292 341 IPR001881 GO:0005509
Lele02g1940 753 SMART serkin_6 421 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1940 753 SMART egf_5 250 291 IPR000742 -
Lele02g1940 753 SMART egf_5 295 341 IPR000742 -
Lele02g1940 753 SUPERFAMILY Protein kinase-like (PK-like) 399 694 IPR011009 -
Lele02g1940 753 FunFam Wall-associated receptor kinase 2 498 709 - -
Lele02g1940 753 CDD STKc_IRAK 427 690 - -
Lele02g1940 753 ProSitePatterns Calcium-binding EGF-like domain signature. 292 319 IPR018097 GO:0005509
Lele02g1940 753 Pfam Protein kinase domain 422 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1940 753 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 310 321 IPR000152 -
Lele02g1940 753 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 22 694 IPR045274 GO:0007166
Lele02g1940 753 Gene3D Laminin 246 334 - -
Lele02g1940 753 Pfam Calcium-binding EGF domain 292 330 IPR001881 GO:0005509
Lele02g1940 753 Gene3D Transferase(Phosphotransferase) domain 1 498 713 - -
Lele02g1940 753 FunFam Wall-associated receptor kinase 2 391 497 - -
Lele02g1940 753 ProSiteProfiles EGF-like domain profile. 247 282 IPR000742 -
Lele02g1940 753 SUPERFAMILY EGF/Laminin 292 330 - -
Lele02g1940 753 Gene3D Phosphorylase Kinase; domain 1 392 497 - -
Lele02g1940 753 ProSiteProfiles Protein kinase domain profile. 421 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1940 753 FunFam Fibrillin 2 287 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1940 Lele-ChrLele02 22862407 22867928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1940 4 751 Receptor kinase-like Gene Family AT1G21230 41.956 7.59e-174 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Lele02g1940 Pkinase 6.8e-52 CL0016