Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1930 ATGCCTACCAACATGAAAAACCTTATCTTCCATTTCTCCTTCATGTTCTCCATGCTTTATCTCATGGTTTTTTGCCCATGTTTATGTGACTCCAATTTTACAAATTCCGATGAATTGGCTCTTCTTGCTTTCAAATCTTCTGTAAGTGATCCTTACAATCACTTAGAAAACTGGTCCAATTCATCTTCCATATGTAATTGGTCTGGTGTTACATGTGATTCTAAGCATGAGAGAGTGAAAATACTGATTCTTTCTAAGATGGGTCTCAAAGGAACCTTACCAAAAGAGTTGATTCAGTTGCAGAAGTTAGAAATTCTGAACTTGAGCTATAATGCATTCAGTGGAGAAATCCCAAGTTGGATTGGAAGCTTATTTACTCTTCAACACTTGATTCTTGGCAATAATAGTTTTGAAGGCATGATTCCTCCAAGTATATCCAATTTGTCAAAGTTGGAGACCCTGGATTTGAATTCTAATTCTATCCAAGGATCTATTCCCTTTGATATTGGAAGGCTTCAACATCTCAAAATTTTACGCCTTTCTGTGAACAAGCTCTCAGGAGTTATACCTCCAACTATTTCTAACTTATCCTCACTTGAGTGGATCTCTTTGTCGCTCAACCTCCTACAAGGACATATCCCCATAGAAATGAATAAGCTTACAAAGCTGAAACTTTTGTACTTGGAAGTTAATAAGTTGACTGGACAAATACCAAGAAGTATTGGTAACTTGATCATGCTTCAGGAATTATATCTTTCAAACAATAACTTGCAAGGAGATATTCCCAGCGAAATTAGCAATCTTACAAGTGCAAACAAAATAAACTTGAATGATAATCAATTGTCGGGTCACATTCCAGAAAGCATTGGAAAACTGACTATGCTTCAAGAGTTATCTCTTGCCAACAATAATTTAGAAGGAAATATTCCCAATGAAATTAGAAGCATTACAAATTTGAAAATTATCAATCTATCAGTTAATCAACTATTTGGCCACATACCAAGAGGCATTGGAAACTTGACTATGCTTCAGGATTTAAATCTTGAAACCAATAATTTAGAAGGCTCAATACCTATGGAAATAGGCAATCTTCAACAACTAGAGACGCTATTGTTGTCTCAAAACAAGTTGAGCGAATCTATCCCATCAGAAATTTTCAACATCTCGACTTTGAGGGTCTTGTCTCTCTCAAACAATTCTCTATCAGGAAGCCTTCCATCGGATTTTGGATATGGCCTTTCTAATCTAGAAATTTTGTATTTATGGGGCAACAAACTTTCCGGAAGAATCCCAAATACTATATCCAATGCTTCTAAATTAACTATTCTAGAATTGGAGCAAAATAATTTTGAAGGCGTTTTACCAATCACACTTGGCCATTTAAGATACCTAGAAACCCTTTCGGTATATGATAACAATTTCACCATAATAGATGCTTCCAATTCTGAAACTGGCTTTTTTATCTCGTTGTCAACTTGTCGACGTTTGAAAAGTCTCATTCTCTCACGGAATCCATTAAATATGAAACTTCCCAAGTCCATTGGGAACCTGCCTCATTCTCTAGAGACGCTGATGATAGACTTCTGCGGGATTAATGGTAACATACCATCAGAAATTGGGAATCTGTCAAACTTGGTTAAGCTATCTTTGGCTGGAAATGCTTTAAATGGATCAATTCCAACAACAATCAGCAACTTACAGGCTCTTCAGCATTTGAGTCTTGTAGGCAATGAGCTAGATGGTTTAATTGTTGATGAGCTTTGTGATATTACAAGACTTGCATATTTATATCTATCTCGGAACAAATTTTCAGGAGCAATCCCACCTTGCTTAGGAAATCTTATGTCCCTGCAAGACCTTTACTTGGGCGCCAATAACTTGATTTCAGAGATACCTTCTTCCTTATGGAATTTGGCAGGTACATTGAAAGTAAACCTATCTTCTAACATGTTAGTTGGAAATCTTTCATTCAAGATTGGGAACATGAAAGCTATGATTCTATTAGATTTGTCAAGAAATCATATTTCAGGCAGCATTCCAACAACCATAGGTGGCTTGCAAAATTTGCAAGATTTCTCCTTAGCACATAACATATTGCAAGGGACGATTCCAGAATCACTTGGGAATTCGCTAAGCTTAGAAAAGCTAGACCTTTCCCAAAATAATTTATTTGGTGAGATTCCTAAATCGCTCGAGTCACTTAGATCCCTTAAGTATGTCAACCTCTCTTATAACCAACTACAAGGTAAGATTCCAAGTGGTGGGGTCTTCAAGAATTTGACGGCTGAATATTTCATGATGAATAAAGCACTCTGTGGTGAACCAAAAATGCAAGTACCCCCATGCAGAAAAGGGTCATCAATGGCAAAATTGATTTTGTTGAAATGCATACTCCCTGTCGTTTTGTCAACAATTTTGGTGGTTTTAATCGTTATCCTCATCCAACGTAAACAAATGAATTCTAGGCATGCCATGAAACGAGATTTATCAACTTTAGGAACGCCAAGAAGGATTTCTTACTTTGAAATTTTGGATGCAACCAATAAATTTGATGAGAGTAACTTACTAGGAAGGGGGAGTTTTGGTTCTGTATTCAAAGGAAGGCTTTCAAGTGGAATAGTGGTTGCTTTTAAAATATTCAACTTAGAATCAGAAGAATTGTCAAGGAGCTTTGAAGTGGAATGTGACACAATGCGTAGTGTTCGACATCGCAATTTGGTGAAGATCATTAGCAGTTGTTCCAATGATGACTTCAAGTGTTTGATAATGGAGTTCATTCCAAATGGAAGTCTTGAAAAATGGTTATATTCTCGTAACTATTGTTTAGATTTTCTTCAGAGGTTAAATATAATGATAAATATTGCATCTGCTTTGGAATATCTCCATCATGGCTTGTCAACACCAATTGTCCACTGTGATTTGAAGCCCAGTAACATTCTGTTAGATGATAACCTGGTTGCTCATGTGAGTGACTTTGGAATTGCAAAATTTTTAGACGAAGGGAAATCAAAGATACAGACTAAGACATTGCCCACAATTGGTTATGTTGCACCTGAGTATGGATCTGTTGGAATTGTTTCAACAAAAGTAGATGTGTACAGCTATGGAATAATACTAATAGAAGTATTCACAGGAAGAAGGCCAACAGAAGATATGTTTGTGGATGGATTGAGCTTGAAGAGTTGGGTTAGTGAATCAACGTCATCATCAAATGCATTAACTCAAGTCATAGATTCCAACTTATTACAAGGAGATGATGAACAATATATTGGCAATATTTTGAGAACTACGTCCACTATTCTTGAATTGGCCCTAAATTGTTGCTCCCATTTTTCACAAAGGCGTTGCAATATGTCAGATGTTGTGGTATCATTAAAAAAGATCAAGGACATGTTCATGCAAACATGTCATTTTAAGACATATTGA 3426 0.3628 MPTNMKNLIFHFSFMFSMLYLMVFCPCLCDSNFTNSDELALLAFKSSVSDPYNHLENWSNSSSICNWSGVTCDSKHERVKILILSKMGLKGTLPKELIQLQKLEILNLSYNAFSGEIPSWIGSLFTLQHLILGNNSFEGMIPPSISNLSKLETLDLNSNSIQGSIPFDIGRLQHLKILRLSVNKLSGVIPPTISNLSSLEWISLSLNLLQGHIPIEMNKLTKLKLLYLEVNKLTGQIPRSIGNLIMLQELYLSNNNLQGDIPSEISNLTSANKINLNDNQLSGHIPESIGKLTMLQELSLANNNLEGNIPNEIRSITNLKIINLSVNQLFGHIPRGIGNLTMLQDLNLETNNLEGSIPMEIGNLQQLETLLLSQNKLSESIPSEIFNISTLRVLSLSNNSLSGSLPSDFGYGLSNLEILYLWGNKLSGRIPNTISNASKLTILELEQNNFEGVLPITLGHLRYLETLSVYDNNFTIIDASNSETGFFISLSTCRRLKSLILSRNPLNMKLPKSIGNLPHSLETLMIDFCGINGNIPSEIGNLSNLVKLSLAGNALNGSIPTTISNLQALQHLSLVGNELDGLIVDELCDITRLAYLYLSRNKFSGAIPPCLGNLMSLQDLYLGANNLISEIPSSLWNLAGTLKVNLSSNMLVGNLSFKIGNMKAMILLDLSRNHISGSIPTTIGGLQNLQDFSLAHNILQGTIPESLGNSLSLEKLDLSQNNLFGEIPKSLESLRSLKYVNLSYNQLQGKIPSGGVFKNLTAEYFMMNKALCGEPKMQVPPCRKGSSMAKLILLKCILPVVLSTILVVLIVILIQRKQMNSRHAMKRDLSTLGTPRRISYFEILDATNKFDESNLLGRGSFGSVFKGRLSSGIVVAFKIFNLESEELSRSFEVECDTMRSVRHRNLVKIISSCSNDDFKCLIMEFIPNGSLEKWLYSRNYCLDFLQRLNIMINIASALEYLHHGLSTPIVHCDLKPSNILLDDNLVAHVSDFGIAKFLDEGKSKIQTKTLPTIGYVAPEYGSVGIVSTKVDVYSYGIILIEVFTGRRPTEDMFVDGLSLKSWVSESTSSSNALTQVIDSNLLQGDDEQYIGNILRTTSTILELALNCCSHFSQRRCNMSDVVVSLKKIKDMFMQTCHFKTY 1141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1930 1141 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 926 1137 - -
Lele02g1930 1141 FunFam Serine-threonine protein kinase plant-type 831 925 - -
Lele02g1930 1141 SMART LRR_sd22_2 614 640 - -
Lele02g1930 1141 SMART LRR_sd22_2 686 709 - -
Lele02g1930 1141 SMART LRR_sd22_2 413 439 - -
Lele02g1930 1141 SMART LRR_sd22_2 542 568 - -
Lele02g1930 1141 SMART LRR_sd22_2 148 169 - -
Lele02g1930 1141 SMART LRR_sd22_2 710 736 - -
Lele02g1930 1141 SMART LRR_sd22_2 172 198 - -
Lele02g1930 1141 SMART LRR_sd22_2 292 326 - -
Lele02g1930 1141 SMART LRR_sd22_2 364 390 - -
Lele02g1930 1141 SMART LRR_sd22_2 244 270 - -
Lele02g1930 1141 Gene3D Ribonuclease Inhibitor 34 314 IPR032675 -
Lele02g1930 1141 SMART serkin_6 850 1132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1930 1141 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 267 477 - -
Lele02g1930 1141 Gene3D Transferase(Phosphotransferase) domain 1 926 1138 - -
Lele02g1930 1141 ProSitePatterns Serine/Threonine protein kinases active-site signature. 969 981 IPR008271 GO:0004672|GO:0006468
Lele02g1930 1141 Gene3D Phosphorylase Kinase; domain 1 832 925 - -
Lele02g1930 1141 SUPERFAMILY Protein kinase-like (PK-like) 826 1125 IPR011009 -
Lele02g1930 1141 PANTHER OS04G0122200 PROTEIN 352 1130 - -
Lele02g1930 1141 Pfam Leucine rich repeat 102 161 IPR001611 GO:0005515
Lele02g1930 1141 Pfam Leucine rich repeat 247 305 IPR001611 GO:0005515
Lele02g1930 1141 Pfam Leucine rich repeat 174 233 IPR001611 GO:0005515
Lele02g1930 1141 Pfam Leucine rich repeat 520 579 IPR001611 GO:0005515
Lele02g1930 1141 Pfam Leucine rich repeat 390 450 IPR001611 GO:0005515
Lele02g1930 1141 Pfam Leucine rich repeat 688 747 IPR001611 GO:0005515
Lele02g1930 1141 ProSiteProfiles Protein kinase domain profile. 850 1133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1930 1141 SUPERFAMILY RNI-like 345 753 - -
Lele02g1930 1141 Gene3D Ribonuclease Inhibitor 315 479 IPR032675 -
Lele02g1930 1141 Gene3D Ribonuclease Inhibitor 480 789 IPR032675 -
Lele02g1930 1141 SMART LRR_typ_2 100 124 IPR003591 -
Lele02g1930 1141 SMART LRR_typ_2 542 566 IPR003591 -
Lele02g1930 1141 SMART LRR_typ_2 244 268 IPR003591 -
Lele02g1930 1141 SMART LRR_typ_2 292 315 IPR003591 -
Lele02g1930 1141 SMART LRR_typ_2 734 759 IPR003591 -
Lele02g1930 1141 SMART LRR_typ_2 316 340 IPR003591 -
Lele02g1930 1141 SMART LRR_typ_2 220 243 IPR003591 -
Lele02g1930 1141 SMART LRR_typ_2 413 437 IPR003591 -
Lele02g1930 1141 SMART LRR_typ_2 364 388 IPR003591 -
Lele02g1930 1141 SMART LRR_typ_2 148 172 IPR003591 -
Lele02g1930 1141 SMART LRR_typ_2 614 638 IPR003591 -
Lele02g1930 1141 SMART LRR_typ_2 662 686 IPR003591 -
Lele02g1930 1141 Pfam Protein kinase domain 851 1121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1930 1141 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 171 261 - -
Lele02g1930 1141 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 34 170 - -
Lele02g1930 1141 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 489 786 - -
Lele02g1930 1141 SUPERFAMILY RNI-like 75 378 - -
Lele02g1930 1141 ProSitePatterns Protein kinases ATP-binding region signature. 856 878 IPR017441 GO:0005524
Lele02g1930 1141 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1930 Lele-ChrLele02 22766675 22778844 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1930 13 1129 Receptor kinase-like Gene Family AT5G46330 35.392 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele02g1930 Pkinase 2.9e-44 CL0016