Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1929 ATGCGAAATCTTATCTTTCATTTCTGCTTCATGTTCTTAATGGTCTGCCCATGTTTATGTGACTCCAATTTTACTAGTTCCGATGAACTGGCGCTTCTTGCTTTCAAATCTTCTGTTAGTGATCCTTACAATCACTTGAAAAGCTGGTCCGATTCCTCTTCCATGTGCAGTTGGTCTGGTGTTACATGTGATTCTAACCATGAGAGGGTGAAAATACTGAGTCTTCCTAAGATGGGTCTCAAAGGAACATTACCCTCACAAATTGGCAATTTGTCCTTCCTTGTAAAACTCGACCTCAACAACAACACCTTGTATGGTAAGTTCCCAAAAGAGTTGATTCAGTTGCAGAGGTTAGAAATTCTGAACTTGAGCTATAATGCATTCAATGGAGAAATCCCAAGTTGGATTGGAAGCTTATTTACTCTTCAACACTTGGTTCTTGGCAACAATAGTTTTGGAGGCATGGTTCCTTTAAGTATATCCAATTTGTCTAAGTTGGAGACTTTGGATTTGAATTCTAATTTTATTGAAGGGGCTATTCCTTTTGATATTGGAAGGCTTCAACATCTCAAAATTTTACGACTTTCTGTGAATAAGCTTTCAGGAATTATACCTTCAACTATCTCTAACATATCCTCACTTGAGTGGCTCTCTTTGTCTCTCAACCTCTTATCAGGAAGTATTCCCATAGAAATGTATAAGCTTACGAAGCTGAAAATTATATACTTGGGAGTTAATAAGTTGACGGGCCAAATACCAAGAAGTATTGGGAACTTGATCATGCTTCAAGAATTATATCTTTCAATCAATAACTTACAAGGAAATATTCCCAACGAGATTAGCAATCTTACAAATGCGAAAAAAATATACTTGAATGATAATCAATTGTCTGGTTACATACCAAAAAGCATTGGAAAATTGACTATGCTTCAAGAGTTATCTCTTGCCAACAATAACTTAGAAGGAAATATGCCCGATGAAATTAGAAGCCTTACAAATCTGAAAATTATAGACCTATCAGTTAATCAACTATTTGGTCACATAACAAGAGGAATTGGAAACTTGTCTATGCTTCAAGATTTATATCTTGAAAGTAATAATTTACAAGGCCCAATACCTCCGGAAATAGGCAATCTTCAACAACTTGAGACATTATTATACTTAGTAACCCTTCGGTTACATTATAACAATTTCACCATGATAGATGCTTCCAATTCTCAAACTGGCTTTTTTAGCTCGTTGTCAAACTGTCGACATTTGAAAACTCTGAGTCTCTCAAACAATCCATTATTGCATATGAAGCTTCCCAAGTCCATTGGAAACTTGTCTGACTCTCTACAGACGCTGTTGATAGACTCTTGCGGGATTAATGATGAAGGGAAATCAAGGACCCAAACAAAGACAATACCTACAATTGGTTATGTTGCACCTGAATATGGAACTCTTGGAATTGTTTCAACAAAAGTAGATGTATACAGCTATGGAATAATACTAATAGAAGTATTCACAAGAAAAAAGCCAACAGAAGATATGTTTGTGGATGGATTGAGCTTGAAGAGTTGGGTTTGTGAATCAATGTCATCAAATGCCTTGGCTCAAGTCATAGATTCCAATTTATTACAATATGATGAACAATATATTGGAAATATTTTGAAAAGTACATCCACTATTCTTAAATTGGCCTTGCATTGTTGCGCCAATTCTTCACAAAGGCGTTGCAGTATGTCAGATGTTGTGGTATCATTAAACAAGATCAAGGACATGTTTATGGAAACATGTTATTTAAAGAACTGTTGA 1797 0.3561 MRNLIFHFCFMFLMVCPCLCDSNFTSSDELALLAFKSSVSDPYNHLKSWSDSSSMCSWSGVTCDSNHERVKILSLPKMGLKGTLPSQIGNLSFLVKLDLNNNTLYGKFPKELIQLQRLEILNLSYNAFNGEIPSWIGSLFTLQHLVLGNNSFGGMVPLSISNLSKLETLDLNSNFIEGAIPFDIGRLQHLKILRLSVNKLSGIIPSTISNISSLEWLSLSLNLLSGSIPIEMYKLTKLKIIYLGVNKLTGQIPRSIGNLIMLQELYLSINNLQGNIPNEISNLTNAKKIYLNDNQLSGYIPKSIGKLTMLQELSLANNNLEGNMPDEIRSLTNLKIIDLSVNQLFGHITRGIGNLSMLQDLYLESNNLQGPIPPEIGNLQQLETLLYLVTLRLHYNNFTMIDASNSQTGFFSSLSNCRHLKTLSLSNNPLLHMKLPKSIGNLSDSLQTLLIDSCGINDEGKSRTQTKTIPTIGYVAPEYGTLGIVSTKVDVYSYGIILIEVFTRKKPTEDMFVDGLSLKSWVCESMSSNALAQVIDSNLLQYDEQYIGNILKSTSTILKLALHCCANSSQRRCSMSDVVVSLNKIKDMFMETCYLKNC 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1929 598 Pfam Leucine rich repeat 285 344 IPR001611 GO:0005515
Lele02g1929 598 Pfam Leucine rich repeat 189 248 IPR001611 GO:0005515
Lele02g1929 598 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 136 228 - -
Lele02g1929 598 SUPERFAMILY Protein kinase-like (PK-like) 464 589 IPR011009 -
Lele02g1929 598 ProSiteProfiles Protein kinase domain profile. 266 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1929 598 PANTHER LEUCINE RICH REPEAT KINASE 2 304 457 - -
Lele02g1929 598 SUPERFAMILY RNI-like 73 399 - -
Lele02g1929 598 SMART LRR_typ_2 355 379 IPR003591 -
Lele02g1929 598 SMART LRR_typ_2 115 139 IPR003591 -
Lele02g1929 598 SMART LRR_typ_2 417 442 IPR003591 -
Lele02g1929 598 SMART LRR_typ_2 307 331 IPR003591 -
Lele02g1929 598 SMART LRR_typ_2 163 186 IPR003591 -
Lele02g1929 598 SMART LRR_typ_2 187 210 IPR003591 -
Lele02g1929 598 SMART LRR_typ_2 259 283 IPR003591 -
Lele02g1929 598 Gene3D Ribonuclease Inhibitor 235 407 IPR032675 -
Lele02g1929 598 SUPERFAMILY L domain-like 388 457 - -
Lele02g1929 598 Pfam Protein tyrosine and serine/threonine kinase 458 581 IPR001245 GO:0004672|GO:0006468
Lele02g1929 598 Gene3D Ribonuclease Inhibitor 180 234 IPR032675 -
Lele02g1929 598 Gene3D Ribonuclease Inhibitor 25 179 IPR032675 -
Lele02g1929 598 Gene3D Transferase(Phosphotransferase) domain 1 442 594 - -
Lele02g1929 598 SMART LRR_sd22_2 187 213 - -
Lele02g1929 598 SMART LRR_sd22_2 355 381 - -
Lele02g1929 598 SMART LRR_sd22_2 417 444 - -
Lele02g1929 598 SMART LRR_sd22_2 331 354 - -
Lele02g1929 598 SMART LRR_sd22_2 235 261 - -
Lele02g1929 598 SMART LRR_sd22_2 163 178 - -
Lele02g1929 598 FunFam Leucine-rich repeat receptor-like kinase 29 135 - -
Lele02g1929 598 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 230 399 - -
Lele02g1929 598 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1929 Lele-ChrLele02 22742046 22752787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1929 461 593 Receptor kinase-like Gene Family AT1G08590 30.597 9.66e-14 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele02g1929 PK_Tyr_Ser-Thr 1.7e-07 CL0016