Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1925 ATGATGCTAGTTGATGTTGGTGCTCGCGGCCGTCTGGTTCCTCTGGATATTTCGACGTTCTTCTGGGTTTTCTGTTGTTTTCGGTTCTCCGGTCGTGCGAATGTTCAAGAAGAGTTTGACGACATGAGGAAAAAACTCGATACTCGTTTCCCTGCCGCTCGAATTAAGAAAATTATGCAATCGGATGAGGATGTAGGGAAAATTTCCATGGCCGTGCCTCTTCTTGTTTCTAAAGCACTAGAACTCTTTCTGCAAGATTTATGTGATCGGACATATGACATAACATTGAGAAGAGGGGCAAAGACAATGAATTCTTATCATTTAAAACAATGTGTACAGAGTTTTACTGTCTTCGATTTTCTGAAAGATATTGTCCGCAAGGTTCCTGATTTAGGTGGCCACGCTGCTTCTGCAGATGACCGTACTGTCTGCAAGAGAAGGAAAGTCCATGACGATGGAAATGACAGTGACGATGATGCAAAAAGAAATAAGATGCCAGAAAATGCACATCAAACTGGTGGTAGGGGAAGAGGTCGTGGCAGAGGCAGGGGTCGTGGCAGAGGAAGTAGAACAGCAGATCGTGAGAATAATGCACATGTCAAGTCTGAAGATGATCATCATCATCATCATACGGATGCGTCGAAGCACCATGACATGCGCAGTCACAGCAATGAAAGCATGGAAACTAGTACAGAACATGAAGTGAAGCCTTCCATTAGCAAGACATCAGAAGCATGCTTTAGAAATTTTGACTTAAATATGGATCCCGTGGAGGATTACGGCGATTCACCCCCCAGCATAGCTGCTGTCCCACCTTGTCCATCCAAAAAGCCAACAGAAACTCGTCCACCTGAAAAACCCACCACAACTTGTCCATCTGAAAAACCAACCACCACAGAATTGAGACACGAAGAAATCCCGGGGTGGTCGCTATCCGACGTGGAAAAAATGGCCATTGATCCTATTCAACTAGTCAACATGAATGGAAGGATGGATGAAGAAGATGAAGATTATGATGAAGAAAGTTGA 1029 0.4422 MMLVDVGARGRLVPLDISTFFWVFCCFRFSGRANVQEEFDDMRKKLDTRFPAARIKKIMQSDEDVGKISMAVPLLVSKALELFLQDLCDRTYDITLRRGAKTMNSYHLKQCVQSFTVFDFLKDIVRKVPDLGGHAASADDRTVCKRRKVHDDGNDSDDDAKRNKMPENAHQTGGRGRGRGRGRGRGRGSRTADRENNAHVKSEDDHHHHHTDASKHHDMRSHSNESMETSTEHEVKPSISKTSEACFRNFDLNMDPVEDYGDSPPSIAAVPPCPSKKPTETRPPEKPTTTCPSEKPTTTELRHEEIPGWSLSDVEKMAIDPIQLVNMNGRMDEEDEDYDEES 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1925 342 Coils Coil 331 342 - -
Lele02g1925 342 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 38 188 - -
Lele02g1925 342 Gene3D Histone, subunit A 36 127 IPR009072 GO:0046982
Lele02g1925 342 SUPERFAMILY Histone-fold 44 129 IPR009072 GO:0046982
Lele02g1925 342 MobiDBLite consensus disorder prediction 145 242 - -
Lele02g1925 342 MobiDBLite consensus disorder prediction 256 314 - -
Lele02g1925 342 MobiDBLite consensus disorder prediction 186 239 - -
Lele02g1925 342 FunFam dr1-associated corepressor homolog 42 127 - -
Lele02g1925 342 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 49 112 IPR003958 -
Lele02g1925 342 MobiDBLite consensus disorder prediction 145 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1925 Lele-ChrLele02 22673164 22680120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1925 42 167 CCAAT-HAP5 Transcription Factor Family AT3G12480 66.165 4.85e-55 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lele02g1925 CBFD_NFYB_HMF 1.8e-18 CL0012