Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1903 ATGAAGATTCTGGCTCTGTATGCGTTGGTCTCCTTCATCATTATTAGTCACTCAGCACAGGTTGTTGCAGATGATGGCAATTCAGGTACAAGGACGATTGATGTGACTGGAAACAAACTCACAGGTTCAATACCCAAGGCTTTGAGGGAAAATGCTAATTTGCAGCTCAGTTTCGCCAACAATCCAGATCTCTGCGAGTCAGATTCATGCGACAAAGAACGCAAGTTTGTAATTCCTCTTGTTACATCAATTGCAGTTCTTGTCCTAATTGCCATTATTTCTATGATTATCTGGAGACTGAGAAAGAAAAGACAAGATGTGGATTTGTCTACCAAATCCCTCAAGATGGAAGTTCCAAAACAAAAGGGTCGAGAATTTTCTTACTCACAAGTCCTTCGTATCACCGACAATTTCAAAGCTCTTATTGGAGAAGGAGGATTCGGTAAAGTTTACCTTGGTACTTTAGAAGATGATTCTCAAGTTGCAGTAAAATTACTTTCTCCAACATCAAAACAAGGATACAAGGAATTTCAATCAGAGGCTCAACTGTTGACAGTTATTCATCATAGAAACCTGGTTTCACTCATTGGGTATTGCCATGAGAACAACATCATGGCATTGATTTATGAATATATGGATAATGGGGACCTTGGCCTACTATTATCAGATGAAAGAAATTCTCATCTATCAACTCAACCAGCTGGTACTCCTGGTTACATTGATCCCGAAGGATCTGAGGATATCAGTTTCATTCTTGATTGGATTCATCCCAAAATTGAATGCGTGGATATTGAAGGCATTGTCGATCCAAGATTAGCTTCAGAATTCCATGTTAGTTCAACATGGAGGGCTATTGAAGTAGCACTTTCATGTGTCCTACCAACACCTTCCCAAAGGCCAGACATAAGTTACATATTGCAAGAACTACAAGATTGTTTAGCTTTGGAGATGGATCAAGCCAGAGTACATAATATGACAAGTAGTTCACATGATTCTAATGTGAACAGTGAATTAATCACTCTTGTCCATGCTAGATTTCAAAGATCAGGACAATTAAATAAGAAAATCGATATTTATAGTTTGGGAATGATTCTTCTTCAACTTAAAACGGGTCGTCCTCCAATAAAGAGGAAACTTGAGAATACGAGTTTCATTGTTGATTGGGTTCAACCTAAAATTGAAAGTGGGGATATTGAAAGCATTGTTGATCCAACATTTGATGGAGAATTCCATGTTAGTTCATCATGGAGAGCTATTGAAGTAGCACTTTCATGTGTCCTACCGACACCATCCCAAAGGCCAGATATAAGTTACATTTTGCAAGAACTACAAGAATGTTTAGCTTTGGAGATAGATCAAGAGAAAATAGATAAGACTACGACAGGGAAGTATGAGAAGTGA 1401 0.3826 MKILALYALVSFIIISHSAQVVADDGNSGTRTIDVTGNKLTGSIPKALRENANLQLSFANNPDLCESDSCDKERKFVIPLVTSIAVLVLIAIISMIIWRLRKKRQDVDLSTKSLKMEVPKQKGREFSYSQVLRITDNFKALIGEGGFGKVYLGTLEDDSQVAVKLLSPTSKQGYKEFQSEAQLLTVIHHRNLVSLIGYCHENNIMALIYEYMDNGDLGLLLSDERNSHLSTQPAGTPGYIDPEGSEDISFILDWIHPKIECVDIEGIVDPRLASEFHVSSTWRAIEVALSCVLPTPSQRPDISYILQELQDCLALEMDQARVHNMTSSSHDSNVNSELITLVHARFQRSGQLNKKIDIYSLGMILLQLKTGRPPIKRKLENTSFIVDWVQPKIESGDIESIVDPTFDGEFHVSSSWRAIEVALSCVLPTPSQRPDISYILQELQECLALEIDQEKIDKTTTGKYEK 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1903 466 ProSiteProfiles Protein kinase domain profile. 136 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1903 466 ProSitePatterns Protein kinases ATP-binding region signature. 142 164 IPR017441 GO:0005524
Lele02g1903 466 PANTHER OS07G0107800 PROTEIN-RELATED 346 447 - -
Lele02g1903 466 Gene3D Phosphorylase Kinase; domain 1 108 211 - -
Lele02g1903 466 Gene3D Transferase(Phosphotransferase) domain 1 334 462 - -
Lele02g1903 466 Gene3D Transferase(Phosphotransferase) domain 1 244 330 - -
Lele02g1903 466 Pfam Protein tyrosine and serine/threonine kinase 138 231 IPR001245 GO:0004672|GO:0006468
Lele02g1903 466 SUPERFAMILY Protein kinase-like (PK-like) 124 320 IPR011009 -
Lele02g1903 466 SUPERFAMILY Protein kinase-like (PK-like) 350 446 IPR011009 -
Lele02g1903 466 FunFam Leucine-rich repeat receptor-like protein kinase 114 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1903 Lele-ChrLele02 22455406 22463825 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1903 33 450 Receptor kinase-like Gene Family AT1G51850 32.960 2.53e-68 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele02g1903 PK_Tyr_Ser-Thr 1.5e-17 CL0016