Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1898 ATGCTAAGAGCTTCACATTTTCCAATGATGGCGTCTCCAGCTCTCGGTGCTCTGAGGCTATCTCTGATTCCCGTTCGCTCTATCTCTTCTCCTTCCAATCTTCGCGCCTTCTTCATTTGTTCTCTATCTCCCAGGGTTTCCTCTCATACATTTCAAACTTGTTCACAACCTCTTACTTCCTTCAATTTCAAGCAACTCCTTCCTCCGATAGGGTTGTCGCGCCCCCTAGTAGCAGCCCTGTGCAGCAGCAGCAGCAGCAGTGCTGAACCTGAAGGTGCTAGGGAGATCCTGGTGCAACACTTGCTTGTTAAAGAAGATGACCAGAAGCTACTATTGGATCTTCAGCAGAGAATCTCATCAGGTGAAGACTTGAGTGATCTTGCCGTAGAATACTCAATATGCCCATCCAAAGAAGAAGGAGGAATGCTTGGGTGGGTGAGAAAGGGGCAAATGGTTCCTGAATTTGAGGAAGCTGCGTTTAATGCACCTTTAAACAAAGTTGTGAGGTGTAAAACAAAATTTGGATGGCACCTTCTTCAAGTTTTATCTGAAAGGGAAGAATCTATTCTTCAAGACATTCAACCTGATGAGCTTCATGTGAAAATTCAAGATCCCAACTTTATGGAGGAGGGACAATTGATTGATGTTCGAGAGCCTGAGGAAGTGGAGAAAGCGTCGCTGCCAGGTTTTAAGGTTCTTCCCCTCCGACAATTTGGAAATTGGGGACCTGATATCACTAGCACGTTTGATCCTAACAAAGATACATATGTTTTGTGTCATCATGGCATGCGGTCCTTGCAAGTTGCCAAGTGGTTGCAGTCACAGGGGTTTAGAAGAGTATACAATGTATCTGGGGGAATCCATGCATATGCTGTGAAGGTTGATCCATCAGTCCCTACTTACTAG 906 0.4525 MLRASHFPMMASPALGALRLSLIPVRSISSPSNLRAFFICSLSPRVSSHTFQTCSQPLTSFNFKQLLPPIGLSRPLVAALCSSSSSSAEPEGAREILVQHLLVKEDDQKLLLDLQQRISSGEDLSDLAVEYSICPSKEEGGMLGWVRKGQMVPEFEEAAFNAPLNKVVRCKTKFGWHLLQVLSEREESILQDIQPDELHVKIQDPNFMEEGQLIDVREPEEVEKASLPGFKVLPLRQFGNWGPDITSTFDPNKDTYVLCHHGMRSLQVAKWLQSQGFRRVYNVSGGIHAYAVKVDPSVPTY 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1898 301 SMART rhod_4 193 296 IPR001763 -
Lele02g1898 301 Pfam PPIC-type PPIASE domain 102 183 - -
Lele02g1898 301 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 93 183 IPR000297 GO:0003755
Lele02g1898 301 Gene3D - 91 186 IPR046357 GO:0003755
Lele02g1898 301 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 301 - -
Lele02g1898 301 Pfam Rhodanese-like domain 206 291 IPR001763 -
Lele02g1898 301 Gene3D - 187 298 IPR036873 -
Lele02g1898 301 ProSiteProfiles Rhodanese domain profile. 207 299 IPR001763 -
Lele02g1898 301 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 189 299 IPR036873 -
Lele02g1898 301 SUPERFAMILY FKBP-like 95 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1898 Lele-ChrLele02 22421672 22424697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1898 18 301 Sulfurtransferasese or Rhodanese AT5G19370 58.163 2.91e-111 322