Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1888 ATGGATCTTCTAAGAATCCGCAATCCCTCACTCTTCGCCGGGAATTCCTTCTCAGGAGCCGGCGAGCTTTCCACCAACAACAATCATATTCTCCGGCCACCAAAAAGGCCCGTGGGAAGACCTAAGGGTTCAAAGAACAAGTCCAAGGCTGTCGCGGAAATCCCCGCCGACGGACCCTCTAACAACAACCATATTCTCCAGCGAGTAAAAAGACCCGTCGGAAGACCCAAGGGTTCAAAGAACAAGCCCAAGACAGTACCACAACCCATCAAGACCATATCTTTAAATCCGGAGATCGTCATTGGAATCCCCGCCGGCGCCAACGTGTTACACTCGCTCCTCCAGTTCTGTCACTGCCACAACGTCTCCGTCACCGTGTTAAATGCCTCCGGTATAGTTGCCGACATCGTGCCCCTCAACGAACCAAACGTCTCCATCCCCGGACCTTACACGATACTGTCTCTTTCTTGTACCGTCGTGCCAACCCCACCACCACCTTCTGGTGCCATAAACTCGCCGGAGATTAGTTTTCCGTTGGTGGTTGTTCTTTCTTTGCTGAACGATGCTGCATTGGGAGGAATAGTAGCAAGAAGTGTGACAGCGGCGAGCGTGGTGAAGGTGGTGGCGATGACAACGGTGCTTAACAACGTGACGTTTGAGACAAACAACAGAGACGTATAA 681 0.5198 MDLLRIRNPSLFAGNSFSGAGELSTNNNHILRPPKRPVGRPKGSKNKSKAVAEIPADGPSNNNHILQRVKRPVGRPKGSKNKPKTVPQPIKTISLNPEIVIGIPAGANVLHSLLQFCHCHNVSVTVLNASGIVADIVPLNEPNVSIPGPYTILSLSCTVVPTPPPPSGAINSPEISFPLVVVLSLLNDAALGGIVARSVTAASVVKVVAMTTVLNNVTFETNNRDV 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1888 226 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 68 220 IPR014476 GO:0003680
Lele02g1888 226 MobiDBLite consensus disorder prediction 15 31 - -
Lele02g1888 226 Gene3D - 98 224 - -
Lele02g1888 226 SUPERFAMILY AF0104/ALDC/Ptd012-like 99 212 - -
Lele02g1888 226 ProSiteProfiles PPC domain profile profile. 93 226 IPR005175 -
Lele02g1888 226 Pfam Plants and Prokaryotes Conserved (PCC) domain 99 211 IPR005175 -
Lele02g1888 226 MobiDBLite consensus disorder prediction 15 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1888 Lele-ChrLele02 22317056 22317736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1888 59 220 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 31.395 7.41e-16 72.8