Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1885 ATGAGAGGCAGTGAGACATTGTGGGAGAGAGATATTCATATATCTTCAATTGTGGCTACCGCAAGGAGGCTGCCTTCTGATTCTGGCGCTTTTGCTGATTGGCCGGCTTCTTCCGCCGGACGTGCTGCCCCCGCCGATGAGCTCTCCCTCGGCTTCAATGCTGGACCTGCCGCCGGGGGATCTGGTGCTGGTCCTACCTCAGGCATGTGGTCTGGTGGTGCTGCCTCCGCCGCGAGGTCGATCAATTATGGTTACTCGCAGGAGATGGGAGGCATGCTCGGTCTCCGGGATCTCTACGTCGTGGCGCCGGCGTCTTCGTTTCACCACCACCACCACCACCACCAGTCCGCCGTCATGACCGATCCTCATTCGGTGAACAGCTCACACCCCGCAACTGCGCTCGGCGTCGGCGTTATTCCTCTACTCACCGCAACGCCGTGTCTTGGCCCGTCGGCAAACATCACCGCCGAGAACAACGAGACAACATTGATGAGTAATCGAAGCCGAGGTGGGGCAATTCAGCTGTGGCAAGACCAAGAGTCTGAGCATGGTCATTATTTGAAGAAACAAGGTATAACGATGTTTGAACTCAACGACAGTTCTGGGAATCTGGTTCAGAACGAGAATGGATTAACCGTCTCCGCCGCGAACAGCGGCGGTGGAGCAACGTGTCAGGACTGTGGGAACCAAGCGAAGAAGGATTGTAGTTACAGAAGGTGTAGAACTTGCTGCAAGAGTCGGAATTACGACTGCCCTACTCACGTGAAGAGCACGTGGGTGCCGGAGTCTCGGAGGAGAGAACGCCGTCTGATGGCCGCAGCTGCGGCGGCGATTACTACGGGGGGATCCACCGGTGCTACTTCTGGTGTCAAGAAACCTAGACTCGTCACATCTCAACAACAGACCACAACAAACTCTCACACTTCCACATCTAATACCACTCCTCCTAGAAGCTTCGACACTGGTTCTAGCCACCAAGATGCTGGTTTTAAGGAATCACTACCGGGTCAAGTTCGAGCTCCGGCGGTGTTCAAGTGTGTTCGCGTAACGGCGGTGGACGAAGCCGGGCAGGATGAGTTTGCTTATCAGGCTACTGTCAAGATTTGTGGCCATGTTTTCAAAGGGATTCTGTATGATCAAGGGGTTGAGAGTAGAGACGTGTATCCCAATTTGTCGGAGCTTCATCTCGGTGGCAGTTCCGCCGCTACCGCCGGGGATGGGAGGAATGGGGCTTCATCTTCATCCCCAATGCTGGATCCATCTGATGTATATGCAGCTTCAGGTGGTGGAGGAGGCTTACTTGGAGGAGGATCAACTTATGGTAATCCAATACATTAA 1338 0.5441 MRGSETLWERDIHISSIVATARRLPSDSGAFADWPASSAGRAAPADELSLGFNAGPAAGGSGAGPTSGMWSGGAASAARSINYGYSQEMGGMLGLRDLYVVAPASSFHHHHHHHQSAVMTDPHSVNSSHPATALGVGVIPLLTATPCLGPSANITAENNETTLMSNRSRGGAIQLWQDQESEHGHYLKKQGITMFELNDSSGNLVQNENGLTVSAANSGGGATCQDCGNQAKKDCSYRRCRTCCKSRNYDCPTHVKSTWVPESRRRERRLMAAAAAAITTGGSTGATSGVKKPRLVTSQQQTTTNSHTSTSNTTPPRSFDTGSSHQDAGFKESLPGQVRAPAVFKCVRVTAVDEAGQDEFAYQATVKICGHVFKGILYDQGVESRDVYPNLSELHLGGSSAATAGDGRNGASSSSPMLDPSDVYAASGGGGGLLGGGSTYGNPIH 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1885 445 MobiDBLite consensus disorder prediction 399 422 - -
Lele02g1885 445 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 223 265 IPR006510 -
Lele02g1885 445 Pfam Domain of unknown function (DUF702) 221 383 - -
Lele02g1885 445 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 334 382 IPR006511 -
Lele02g1885 445 MobiDBLite consensus disorder prediction 281 330 - -
Lele02g1885 445 MobiDBLite consensus disorder prediction 405 420 - -
Lele02g1885 445 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 106 426 IPR007818 GO:0003700|GO:0006355
Lele02g1885 445 MobiDBLite consensus disorder prediction 281 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1885 Lele-ChrLele02 22290084 22292577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1885 18 423 C2H2 Transcription Factor Family AT5G12330 47.847 1.40e-94 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lele02g1885 DUF702 5.8e-58 No_clan