Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1883 ATGAAAGGCTAATCATGCAAATTGCAATCAGAAGAGAATAAAGGCTCTATGGAGAGCAATAAGAAGAGAAAACTCAAAACACCTGCTCAGGTTTATGCTCTGGAGAAGTTTTATAACGACCACAAAGATCCCACTGAGGAAATGAAATCAGAACTTGCTGAGGAGTTGGGGCTGACAGAAAAACAAGTATCTGGATGGTTTTGCCATCGAAGGTTAAAAGATAAAAGGTTGTTGAAAGATGAAGCTTGTGCTAATGGGCGACGAGATATTTCAAGTGGTGTCATCCAAGATCATGGAAGTGGACTAGGGCAAGATTCATGTGGAAGCACCAAACATGGTGATTATAGGCATCTTGATCCCAAAGAGGTCGAGAGTCGTGGCCTTCATGGTGGTCATGATCTTTTAGTTTCAGATATGGCCTATGAACGTAGGAAACATTATTCAGAAAATGTTTGTGCAATGGAAGCCACATCATCTGAGAGAAGCTCATCTTTGCAAGATCAGGATTCATATGGTGCTGAGCCTTCTGGGTATCGCACTCCTGATGGATCTCTGCCAACTAAAATTCCCAAGGTTGCCACAAACGTGAGATATAAACCATCAGGAGAGATAGAAAACCCTGTTATAACTGCTGTTAAGAAGCAATTAGGAAGAAATTATCGCGAAGATGGTCCTCTACTTGGTATAGAATTTGATCCACTTCCTCCAGGAGCATTCGAGTGTAAAATTGCAGATCCATTTCATGTTGCTGCTGTGAAAAGGCAACCCAGTCTTTGTGCTAGATATGATTCGTATAATACCAAATTCAATTCCCAAGTTTCACATATGGAAGAAGACCTCTCTGATTTCCAGGATAAGAAATCTCACCAGCATTCAAAGCAAAGACCACCTTTGTACAGTCATACCTTTCGATTTCCTACCAGAAACTCTTCTCTGGATCTGTACAAACATTCTGTTGGAGAAGAACCTGCATATAATAGCAAAGAGAATCGTAGAGTTGGCATCAAGCATGGCTTTGAAGGGTTGAAATCTGATGTTGCTTCTAATCATAGTGATCATTATGGTGGTAACCTTCCAGCAAACCCAAAAGATGCACTGTTGCATGGATATGATAATGTCAATTCGAAGAATGTTCAGAGTGAATATAAACTTAAGCCTTCAAACTCGATCAGGAATCCTTTTGTTTCTATGGATGCTAAGGATAGAGGAGGCCTATCCAGTAGGATGATAAAGGAAAAGAAGTCTGGTGAAAAAAGAAAGGCAAGAAAGCAATGCGATGATCCAGATGGACTAAGGATGCTTTCACATGAGGCTGCAAAACGTCTTGTTGAACCTCCTCTAAAATATAATGTGATAGAAGAACATGTCTCCGAGATGCAGCCACATAAGGACCAGAGGTGATCTTCCATGACAGTGTCATCAAACTTTAGTGAGGATGAAACTGCGAATCCCAGCTCATCTCTGGATGAAGCAATCGGTTGGCAGTGA 1488 0.4106 MKGXSCKLQSEENKGSMESNKKRKLKTPAQVYALEKFYNDHKDPTEEMKSELAEELGLTEKQVSGWFCHRRLKDKRLLKDEACANGRRDISSGVIQDHGSGLGQDSCGSTKHGDYRHLDPKEVESRGLHGGHDLLVSDMAYERRKHYSENVCAMEATSSERSSSLQDQDSYGAEPSGYRTPDGSLPTKIPKVATNVRYKPSGEIENPVITAVKKQLGRNYREDGPLLGIEFDPLPPGAFECKIADPFHVAAVKRQPSLCARYDSYNTKFNSQVSHMEEDLSDFQDKKSHQHSKQRPPLYSHTFRFPTRNSSLDLYKHSVGEEPAYNSKENRRVGIKHGFEGLKSDVASNHSDHYGGNLPANPKDALLHGYDNVNSKNVQSEYKLKPSNSIRNPFVSMDAKDRGGLSSRMIKEKKSGEKRKARKQCDDPDGLRMLSHEAAKRLVEPPLKYNVIEEHVSEMQPHKDQRXSSMTVSSNFSEDETANPSSSLDEAIGWQ 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1883 495 MobiDBLite consensus disorder prediction 278 292 - -
Lele02g1883 495 Pfam Homeodomain 21 76 IPR001356 GO:0003677
Lele02g1883 495 CDD homeodomain 21 76 IPR001356 GO:0003677
Lele02g1883 495 SMART HOX_1 19 81 IPR001356 GO:0003677
Lele02g1883 495 MobiDBLite consensus disorder prediction 463 495 - -
Lele02g1883 495 MobiDBLite consensus disorder prediction 155 188 - -
Lele02g1883 495 MobiDBLite consensus disorder prediction 453 495 - -
Lele02g1883 495 MobiDBLite consensus disorder prediction 155 173 - -
Lele02g1883 495 MobiDBLite consensus disorder prediction 110 130 - -
Lele02g1883 495 MobiDBLite consensus disorder prediction 411 430 - -
Lele02g1883 495 Gene3D - 10 90 - -
Lele02g1883 495 SUPERFAMILY Homeodomain-like 19 86 IPR009057 -
Lele02g1883 495 MobiDBLite consensus disorder prediction 276 302 - -
Lele02g1883 495 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 4 489 - -
Lele02g1883 495 ProSiteProfiles 'Homeobox' domain profile. 17 77 IPR001356 GO:0003677
Lele02g1883 495 MobiDBLite consensus disorder prediction 91 130 - -
Lele02g1883 495 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1883 Lele-ChrLele02 22248876 22253300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1883 1 489 Homeobox Transcription Factor Family AT4G03250 36.704 1.83e-71 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lele02g1883 Homeodomain 3.6e-16 CL0123