LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele02g1874	ATGGAGAGGTTGGCCACGTATTTTACGGAAGGCTTACAGGGTTTTCTCGAAGGTGCAGGGGGAGCACATAACAACAACCACCACAAGCATTTCACCGGAAATGGACACCGTGAGGACCACCCTCCGTTGGATGTGCTTGTCGCCTTCCAGCTCGTTCAGGACATGTCCCCGTACGTCAAGTTCAGGCACTTCATCGCAATACAGGCCATCATGGAAGTCGTGGCCACTGAGAGGGTGAATGTTGTTAAAGGTGTTGCTAATGCTTTATTCCATATGCATCATGGTTGTTCAGTTCCTATTGTTCATCGTGACATATCGAGCAAGAATGTCCTTCTAACATCAGAATATGAAGAAGCTCACATCATTGACTTTGGAACCGCGAAGTTTTTAAATCCTGACTCAAACAATATGACCACATTTGCTGGCACATTTGGATATGCTGCTCCAGGAGAGCTTATTTTATCTTTGATAGATAAATCATCAACCACATTTGATTTGCTGTTAAAGGATGTGTTGGACCCACGACTTTCACTACGCAGAAAATCAATTCTTGATGAGGTTATTGCAGTTGTAAAAATAGCATTTTCTTGTTTGAATGAGAATCCTGGATCTCGTCCAACCATGGAACAAGTATCAACGGACCTTGCACGACAACCAAAGTCTCATATGGAAGATCCCTTTGTAACCATCACAATTGGACAACTAATGAAGGATTAA	717	0.431	MERLATYFTEGLQGFLEGAGGAHNNNHHKHFTGNGHREDHPPLDVLVAFQLVQDMSPYVKFRHFIAIQAIMEVVATERVNVVKGVANALFHMHHGCSVPIVHRDISSKNVLLTSEYEEAHIIDFGTAKFLNPDSNNMTTFAGTFGYAAPGELILSLIDKSSTTFDLLLKDVLDPRLSLRRKSILDEVIAVVKIAFSCLNENPGSRPTMEQVSTDLARQPKSHMEDPFVTITIGQLMKD	238

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele02g1874	238	ProSitePatterns	Tyrosine protein kinases specific active-site signature.	100	112	IPR008266	GO:0004672\|GO:0006468
	Lele02g1874	238	PANTHER	LEUCINE RICH REPEAT KINASE 2	76	219	-	-
	Lele02g1874	238	Pfam	Protein kinase domain	66	153	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele02g1874	238	Pfam	GRAS domain family	1	78	IPR005202	-
	Lele02g1874	238	Gene3D	Transferase(Phosphotransferase) domain 1	71	156	-	-
	Lele02g1874	238	SMART	serkin_6	11	221	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele02g1874	238	SUPERFAMILY	Protein kinase-like (PK-like)	77	215	IPR011009	-
	Lele02g1874	238	ProSiteProfiles	Protein kinase domain profile.	1	228	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele02g1874	238	Gene3D	Transferase(Phosphotransferase) domain 1	157	229	-	-
	Lele02g1874	238	ProSiteProfiles	GRAS family profile.	1	238	IPR005202	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele02g1874	Lele-ChrLele02	22150577	22156099	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele02g1874	77	152	Receptor kinase-like Gene Family	AT4G08850	64.474	3.88e-24	99.0

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XI-1	Lele02g1874		Pkinase	2.7e-14	CL0016
	TF	GRAS	Lele02g1874		Pkinase	2.7e-14	CL0016