Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1862 ATGCATCATGGCTGTTCAGTTCCTATTGTTCATCGTGACATATCAAGCAAGAATGTTCTTCTGAACTCAGAATTTGGAGAAGCTCACATCATTGACTTTGGAACAGCGAAGTTTTTGAATCCTGACTCAAACAATATGACCACATTTGCTGGAACATTTGGGTATGCTGCTCCAGCTTGGAGTGTTGACTTTGAGATCATTATGGGAATGCATCCAGGAGAGCTTATTTCATCTTTGATGGAGGAACCAACCACGTATGATTCGTTGTTAAAGGATGTGTTGGACCCACGACTTTCACCACCTAGAAAACTAATCCTTGATGAGGTTGTCGCAGTTGCGAAAATAGCATTCTCTTGTTTGAGTGAGAATCCTCGATCTCGTCCAACCATGGAACATGTATCTACTGAGCTAGAACGGAGACCAAAATCTCATGTGGAAGATCCATTTGACACCATCACAATTGGACAACTAATGAAGGATTAA 483 0.4141 MHHGCSVPIVHRDISSKNVLLNSEFGEAHIIDFGTAKFLNPDSNNMTTFAGTFGYAAPAWSVDFEIIMGMHPGELISSLMEEPTTYDSLLKDVLDPRLSPPRKLILDEVVAVAKIAFSCLSENPRSRPTMEHVSTELERRPKSHVEDPFDTITIGQLMKD 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1862 160 ProSiteProfiles Protein kinase domain profile. 1 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1862 160 Pfam Protein kinase domain 8 60 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1862 160 Gene3D Transferase(Phosphotransferase) domain 1 1 140 - -
Lele02g1862 160 PANTHER LEUCINE RICH REPEAT KINASE 2 1 140 - -
Lele02g1862 160 ProSitePatterns Tyrosine protein kinases specific active-site signature. 9 21 IPR008266 GO:0004672|GO:0006468
Lele02g1862 160 SUPERFAMILY Protein kinase-like (PK-like) 6 135 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1862 Lele-ChrLele02 21971334 21971946 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1862 1 142 Receptor kinase-like Gene Family AT5G65700 39.286 3.23e-21 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele02g1862 Pkinase 5.4e-11 CL0016