Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1861 ATGTTATCTAGGTTTGTTGCTCAAGGTGTGGCTAATGCTTTATTCCATATTCATCATGGTTGTCCAATTCCTATTGTTCATCGTGACATATCAAGCAAGAATGTTCTTCTAAGTTCTGACTATGAAGAAGCTCACATCATCGACTTTGGAACGGCCAAGTTTTTGAATCCTAACTCAAACAATATGACGGCATTCGCTGGCACATTCGGGTATGCTGCACCAGAGATTGCTTTCATCATGCAAGCGAACGAGAAATGTGATGTATACAGCTTTGGAGTGTTGTCTTTAGAAATCATTATGGGTACACATCCTGCGGAGCTTATTTCTTACTTGGCAGAGAAACCCACAAATAATGATTTGTTATTCAAGGAAGTGTTGGACCCACGACTTTCTACCTTGAGAAAACCAATTCTAGATGAAGTCATCTTAGTGGCTAAAATAGCATTTTCTTGTTTGAATGAGAATCCTCATACTCGTCCAACCATGGAACAAGTATCTAAGGAGCTTGTAAGGACCCCAAAATCTCATTTACAAGATCAATTTCACACTATCACAATTGGACAACTGATGAGGGATTGA 579 0.3921 MLSRFVAQGVANALFHIHHGCPIPIVHRDISSKNVLLSSDYEEAHIIDFGTAKFLNPNSNNMTAFAGTFGYAAPEIAFIMQANEKCDVYSFGVLSLEIIMGTHPAELISYLAEKPTNNDLLFKEVLDPRLSTLRKPILDEVILVAKIAFSCLNENPHTRPTMEQVSKELVRTPKSHLQDQFHTITIGQLMRD 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1861 192 SUPERFAMILY Protein kinase-like (PK-like) 4 169 IPR011009 -
Lele02g1861 192 ProSitePatterns Tyrosine protein kinases specific active-site signature. 25 37 IPR008266 GO:0004672|GO:0006468
Lele02g1861 192 Gene3D Transferase(Phosphotransferase) domain 1 3 187 - -
Lele02g1861 192 Pfam Protein kinase domain 4 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1861 192 ProSiteProfiles Protein kinase domain profile. 1 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1861 192 PANTHER LEUCINE RICH REPEAT KINASE 2 7 173 - -
Lele02g1861 192 SMART serkin_6 5 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1861 Lele-ChrLele02 21961473 21963521 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1861 6 174 Receptor kinase-like Gene Family AT5G65700 41.573 5.52e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele02g1861 Pkinase 7.5e-24 CL0016