Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1859 ATGGCAGCTAACGAGAAATGTGATGTCTATAGTTTTGGAGTGTTGACTTTAGAAATCATTATGGGTACACATCCCGCGGAGCTTATTTCATACTTGGCAGAGAAACCAACCAATTATGATTTGTTATTGAAGGATGTGGTAGATCCACGACTTTCTACCTTGAGATTCCAAAAACCAATTCTAGATTATGTCATCTTAATTGCAAAAATAGCATTTTCTTGCTTAAATGAGAATCCTCGGTCTCGTCCAACTATGGAACAAGTATCTATAGAGCTTGCAAGGCCACCAAAATCTCATTTACAGGATCAATTTCATAATATCACAATTGGACAACTCATGAGGGATTGA 348 0.3707 MAANEKCDVYSFGVLTLEIIMGTHPAELISYLAEKPTNYDLLLKDVVDPRLSTLRFQKPILDYVILIAKIAFSCLNENPRSRPTMEQVSIELARPPKSHLQDQFHNITIGQLMRD 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1859 115 Gene3D Transferase(Phosphotransferase) domain 1 1 110 - -
Lele02g1859 115 PANTHER LEUCINE RICH REPEAT KINASE 2 1 96 - -
Lele02g1859 115 Pfam Protein tyrosine and serine/threonine kinase 4 90 IPR001245 GO:0004672|GO:0006468
Lele02g1859 115 SUPERFAMILY Protein kinase-like (PK-like) 3 92 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1859 Lele-ChrLele02 21938782 21939129 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1859 5 106 Receptor kinase-like Gene Family AT1G16150 34.821 9.25e-14 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele02g1859 PK_Tyr_Ser-Thr 8.1e-06 CL0016