Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1858 ATGACCACATTTGCTGGCACATTCGGCTATGCTGCACCAGAGATTGCTTTCATTATGAAAGCAAACGAGAAATGTGATGTATACAGCTTTGGAGTGTTGGCCTTAGAAATCATCATGGGAAATCATCCAGCAGAGCTTGTTTCATCTTTGGCAGAGAATTTAACCACTATTGATCAATTTTTAAAGGATGTGTTGGACCCACGACTTTCTCCACCCACAAAACCAATCCTAGACAATGTGATCTTAGTTACAAAATTAGCTTTTTCTTGCTTGCATGAGAGTCCTCAGTCCCGTCCAACCATGGAACAAGTATCTACGGAGCTTACAAGGACAGTAAAATCTTATTCGGAGGATCAATTTCACACCCTCACAATTGGACAACTAATGAGGGATTGA 396 0.4091 MTTFAGTFGYAAPEIAFIMKANEKCDVYSFGVLALEIIMGNHPAELVSSLAENLTTIDQFLKDVLDPRLSPPTKPILDNVILVTKLAFSCLHESPQSRPTMEQVSTELTRTVKSYSEDQFHTLTIGQLMRD 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1858 131 Gene3D Transferase(Phosphotransferase) domain 1 1 126 - -
Lele02g1858 131 ProSiteProfiles Protein kinase domain profile. 1 124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1858 131 Pfam Protein kinase domain 1 105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1858 131 PANTHER LEUCINE RICH REPEAT KINASE 2 1 112 - -
Lele02g1858 131 SUPERFAMILY Protein kinase-like (PK-like) 1 116 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1858 Lele-ChrLele02 21899794 21900271 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1858 2 122 Receptor kinase-like Gene Family AT4G31110 35.659 7.90e-19 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele02g1858 Pkinase 9.2e-11 CL0016