Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1856 ATGCATCATGGCTGTTCGATTCCTATTATTCATCGCGACATATCAAGCAAGAATGTTCTCCTTAGTTCAGAATATGAAGAAGCTCGAATCATTGACTTTGGGACTGTGAAGTTTTTGAATCCTAATTCAAACAATATAACCGCATTTGCTGGTACATTCGGCTATGCTGCTCCAGAGATTGCTTTCATTATGAAAGCAAACGAGAAATGTGATGTATACAGCTTTGGGGTGTTGACCTTAGAAATCATCATGGGAAGTCATCCAGCAGAGCTTGTTTCATCTTTGGCAGAGAATTCAACCACTATAGATCTGTTGTTAAAGGATGTGTTGGACCCACGACTTTCTCCACCCACAAAACCAATCCTAGATAATGTGATCTTAGTTGCAAAAATAGCTTTTTCTTGCTTGCATGTGACTCCTCAGTCCCGTCCAACCATGGAACAAGTATCTACGGAGCTTGCAAGGACAGTAAAATCTTATTCAGAGGATCAATTTAACACCACCACACTTGGACAACTAATGAGGGATTGA 531 0.403 MHHGCSIPIIHRDISSKNVLLSSEYEEARIIDFGTVKFLNPNSNNITAFAGTFGYAAPEIAFIMKANEKCDVYSFGVLTLEIIMGSHPAELVSSLAENSTTIDLLLKDVLDPRLSPPTKPILDNVILVAKIAFSCLHVTPQSRPTMEQVSTELARTVKSYSEDQFNTTTLGQLMRD 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1856 176 SMART serkin_6 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1856 176 ProSitePatterns Tyrosine protein kinases specific active-site signature. 9 21 IPR008266 GO:0004672|GO:0006468
Lele02g1856 176 SUPERFAMILY Protein kinase-like (PK-like) 1 151 IPR011009 -
Lele02g1856 176 Pfam Protein kinase domain 8 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1856 176 ProSiteProfiles Protein kinase domain profile. 1 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1856 176 Gene3D Transferase(Phosphotransferase) domain 1 1 172 - -
Lele02g1856 176 PANTHER LEUCINE RICH REPEAT KINASE 2 1 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1856 Lele-ChrLele02 21863245 21863855 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1856 1 149 Receptor kinase-like Gene Family AT5G49660 40.625 1.21e-29 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele02g1856 Pkinase 1.5e-21 CL0016