Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1851 ATGCACCATGGACTCTCATGTCCCATAGTTCATCGTGACATATCAAGCAAGAACATCCTGTTAGATTCAGAATATCAAGAAGCTCATGTCACTGACTTCGGAATTGCCAAGTTTCTAAAACTTGACTCCAACAACATGACCTCATTCGCTGGCACCTATGGTTATGCTGCTCCAGCAGAGATTGCTTATACAATGCAAGCAAATGAGAAATGCGATGTTTATAGTTTTGGTGTGCTCGCGTTAGAAATTCTAATGGGAAGACATCCAGGAGAGTTCATTTGTTCCTTAGCAGAGATCCCAACATCCTATAATTTGCCACTTAAGGATGTGTTGGATCAGCGACTTCCTCCACCCTCACATCTAGTTGCTGAGGAAGTAATGTTAATTGCAAAAATAGGACTTGCTTGCCTGAATGAGGATCCTCGGTGCCGACCAACCATGGAACAAGTATCTTTGGAACTTGCAAGGCCTAGACCTTATTCCGTGAACCAATTCAACTACATCACACTTGGACAACTCGTGAGAGCTTAA 531 0.4294 MHHGLSCPIVHRDISSKNILLDSEYQEAHVTDFGIAKFLKLDSNNMTSFAGTYGYAAPAEIAYTMQANEKCDVYSFGVLALEILMGRHPGEFICSLAEIPTSYNLPLKDVLDQRLPPPSHLVAEEVMLIAKIGLACLNEDPRCRPTMEQVSLELARPRPYSVNQFNYITLGQLVRA 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1851 176 Pfam Protein kinase domain 6 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1851 176 ProSitePatterns Tyrosine protein kinases specific active-site signature. 9 21 IPR008266 GO:0004672|GO:0006468
Lele02g1851 176 Gene3D Transferase(Phosphotransferase) domain 1 1 166 - -
Lele02g1851 176 ProSiteProfiles Protein kinase domain profile. 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1851 176 SUPERFAMILY Protein kinase-like (PK-like) 1 151 IPR011009 -
Lele02g1851 176 PANTHER LEUCINE RICH REPEAT KINASE 2 1 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1851 Lele-ChrLele02 21795081 21795704 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1851 1 150 Receptor kinase-like Gene Family AT5G65700 45.625 9.38e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele02g1851 Pkinase 9.6e-21 CL0016