Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1850 ATGCTGCTCCAGGTGAGGCCTCCTTTCTTTGTAGCCAAAAATCGTTGTTATTATTATTCCATGCAATGCAATATAACTATATATTCTAATAGTTTCACTTACTTAATTGAAGCAGAGATTGCTTATACAATGCAAGCAAATGAGAAATGTGATGTTTACAGTTTTGGTGTTCTCACATTAGAAATTCTAATGGGAAGACATCCAGGGGAGTTCATTTGTTCCTTAACAGAGATCCCAACATCCTATGATTTGCCACTTAAGGATGTGTTGGATCAACGACTTCCTGCACCCTCAAACCAAGTTGTCAAGGAAGTAATGTTAATTGCAAAAATAGCACTTGCTTGCCTGAATGAAGATCCTCGGTGCCGACCAACCATGGAACAAGTGTCTATAGAACTTGTGAGGTCTAAGCCTTATTTGGAAAACCAGTTCAACAGCATCACATTTGGACAACTCATGAGAGCTTAA 468 0.3868 MLLQVRPPFFVAKNRCYYYSMQCNITIYSNSFTYLIEAEIAYTMQANEKCDVYSFGVLTLEILMGRHPGEFICSLTEIPTSYDLPLKDVLDQRLPAPSNQVVKEVMLIAKIALACLNEDPRCRPTMEQVSIELVRSKPYLENQFNSITFGQLMRA 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1850 155 SUPERFAMILY Protein kinase-like (PK-like) 39 141 IPR011009 -
Lele02g1850 155 Pfam Protein tyrosine and serine/threonine kinase 39 131 IPR001245 GO:0004672|GO:0006468
Lele02g1850 155 Gene3D Transferase(Phosphotransferase) domain 1 16 148 - -
Lele02g1850 155 PANTHER LEUCINE RICH REPEAT KINASE 2 28 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1850 Lele-ChrLele02 21785382 21785849 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1850 13 135 Receptor kinase-like Gene Family AT2G01210 33.824 8.56e-15 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele02g1850 PK_Tyr_Ser-Thr 4.6e-07 CL0016