Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1847 ATGACCTCATTCGTCGGTACTTATGGCTATGCTGCTCCAGAGATTGCTTATACAATGCAAGCAAATGAGAAATGTGATGTTTATAGCTTTGGTGTTCTCACATTAGAAATTCTAATGGGAAGACATCCGGTAGACTTCATTTGTTACTTAGCAGAGATCCCAACATCCTATGATTTGCCACTTAAGGATGCATTAGATCAGCGACTTCCTGCACCCTCACGCCTAGTTTCTGTGGAAGTAATGTTAATTGCAAAAATTGCACTTGCTTGCCTGAATGAAGATCCTCGGTGCCGACCAACCATGGAACAAGTATCGTTGGAACTTGCGAGGTCTAAACCTTATTCAGTGAACCAGTTTGACAACATCACACTTGGACAACTCGTGAGAGCTTAA 393 0.4224 MTSFVGTYGYAAPEIAYTMQANEKCDVYSFGVLTLEILMGRHPVDFICYLAEIPTSYDLPLKDALDQRLPAPSRLVSVEVMLIAKIALACLNEDPRCRPTMEQVSLELARSKPYSVNQFDNITLGQLVRA 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1847 130 SUPERFAMILY Protein kinase-like (PK-like) 1 105 IPR011009 -
Lele02g1847 130 Pfam Protein kinase domain 1 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1847 130 PANTHER LEUCINE RICH REPEAT KINASE 2 1 112 - -
Lele02g1847 130 ProSiteProfiles Protein kinase domain profile. 1 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1847 130 Gene3D Transferase(Phosphotransferase) domain 1 1 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1847 Lele-ChrLele02 21755086 21755572 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1847 2 113 Receptor kinase-like Gene Family AT5G49660 37.500 3.67e-18 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele02g1847 Pkinase 8.9e-10 CL0016