Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1843 ATGTTGATTGGGTTCTGTACAAAATCTGAAACTGAATTCTCTTCTCTCTTGTTCCACAGATTGCCCGTTTGCTTAGCCATGAATTTTCCTGGTTGGAATTTTGAGAACGATTCTTGTCTCACCAATCAAAAGAAGCCCATGGGGCCGGACCAAGAACTTGGGGAGCTGATATGGCAAAATGGACAGGTAGTTCTGCACAGCCAAACGCAAAAAAAACCAGCCGCAAATTCCATCGACTCGAGACAGTTCCAGAAAAATGATCAATCAACAATCAGGGCTAATGAGTCGTATGGGAACTCAAGTCATTTGATTCAAGAACATGATGCAGTCTCATGGATTCAATATCCACTTGAGGATCCATTGGAACAACAACTATGTTCAAACATTTTATCTGAACTGCCATCCTCTGGACTTGAGTCTGACAAGCCGATAAGGCAACTCGAAGAGGGAAAGTATGTCAAATTCGGCCCCTACAGTGCCTGCCATGTGCCTGCAAGTGCACAAGCACCAAATATAAAGCCCTTTCATCAGGAATTCTCAGGAAATCCTATGCCTGCTCCAAGAGTTCATTTTCCTGATTCAACCCAGAAAAATATTAATTTTGGTGGATCACAAAATGTCCTTAATTTTTCTCAGTTTTCAGAACCCTCCAAAGTAGCCTCAACATCTTCTAATGCACAGTCTGGAGATAAAGGTAATGGTAATCTGTTGCAAAACAAGGGCAAAGAGTGCTCGGTCGTGACAGTTGGTTCAAGTCACTGTGGCAGCAACCAAGTCCCTCTAGATCCTGACATAAGCAGGGCATCAAGCAATGGAGTTTGGACTACTGCTTTATATTCTGAGCCTGAACCCCAGAGGGACGGTGTCAAGAAATCAATTCCTCAGAGTGAGAAAGGGAAGTCAGAGGTGGTTGAACCAACTTTGAGTTCATCATCAGATGACTCGGGTAGTCTTGCAAAAACTTGCTCCTGGTCTGCAAGAAGCCATGGCCAAAAAAGGAAAAAGATAGATACAGAAGAATTAGAGGAACAAAGTGAGGCCACAGAACCCAAATCAGCTGTTGAAAACAAGGCATCTCAGGGGCCTTCCCGAAGGAACCGTGCAGCTGAAGTGCATAATCTCTCAGAAAGGAGACGAAGAGATCGGATCAATGAGAAGATGAGGACATTGCAACAACTCATACCTCACAGTAACAAGACAGATAAAGCATCAATGTTAGATGAGGCAATTGAGTACTTGAAGTCACTTCAGTTACAACTTCAGGTAATGTGGATGGGAGCTGGAATGGCACCAATGATGTTTCCCGGAATTCAGCACTATATGTCCCAAATGGGTATGGGAATGGCTTCGCCCTCGTTTCCTCCTATTCCCAATCCGGTGCAATTACCAAGAACATCACTTGATCATTCCATGTCCATGGCTCAGACACCAAACCAGGGTTTGACGCGTCAAGCTCCTGTTACGGGTCCCTTTACTTTTCAAAATCAGATGCAAAATCAAGCTCTCTCAGAGCAATATGCACGTTATATGGGGTATCAATTTATGCAAAATGCCTCTCAGCCAATGAACGGATTTCATTATGGATCTCAAGTACAACATAGTCAAACAATGATTCCACCCAACAGTAGCAGTGGACCCTTGAATGGAGCTGCAAATAATGATGATAATTTAAGTGGCAAGATGGCTTAA 1689 0.4352 MLIGFCTKSETEFSSLLFHRLPVCLAMNFPGWNFENDSCLTNQKKPMGPDQELGELIWQNGQVVLHSQTQKKPAANSIDSRQFQKNDQSTIRANESYGNSSHLIQEHDAVSWIQYPLEDPLEQQLCSNILSELPSSGLESDKPIRQLEEGKYVKFGPYSACHVPASAQAPNIKPFHQEFSGNPMPAPRVHFPDSTQKNINFGGSQNVLNFSQFSEPSKVASTSSNAQSGDKGNGNLLQNKGKECSVVTVGSSHCGSNQVPLDPDISRASSNGVWTTALYSEPEPQRDGVKKSIPQSEKGKSEVVEPTLSSSSDDSGSLAKTCSWSARSHGQKRKKIDTEELEEQSEATEPKSAVENKASQGPSRRNRAAEVHNLSERRRRDRINEKMRTLQQLIPHSNKTDKASMLDEAIEYLKSLQLQLQVMWMGAGMAPMMFPGIQHYMSQMGMGMASPSFPPIPNPVQLPRTSLDHSMSMAQTPNQGLTRQAPVTGPFTFQNQMQNQALSEQYARYMGYQFMQNASQPMNGFHYGSQVQHSQTMIPPNSSSGPLNGAANNDDNLSGKMA 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1843 562 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 364 431 IPR036638 GO:0046983
Lele02g1843 562 MobiDBLite consensus disorder prediction 302 326 - -
Lele02g1843 562 FunFam Basic helix-loop-helix transcription factor 362 425 - -
Lele02g1843 562 SMART finulus 373 422 IPR011598 GO:0046983
Lele02g1843 562 Gene3D - 363 423 IPR036638 GO:0046983
Lele02g1843 562 MobiDBLite consensus disorder prediction 278 373 - -
Lele02g1843 562 CDD bHLH_AtPIF_like 367 430 - -
Lele02g1843 562 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 367 416 IPR011598 GO:0046983
Lele02g1843 562 Pfam Helix-loop-helix DNA-binding domain 371 417 IPR011598 GO:0046983
Lele02g1843 562 MobiDBLite consensus disorder prediction 284 298 - -
Lele02g1843 562 MobiDBLite consensus disorder prediction 530 562 - -
Lele02g1843 562 MobiDBLite consensus disorder prediction 330 350 - -
Lele02g1843 562 MobiDBLite consensus disorder prediction 530 555 - -
Lele02g1843 562 MobiDBLite consensus disorder prediction 214 238 - -
Lele02g1843 562 PANTHER TRANSCRIPTION FACTOR PIF3 41 536 IPR044273 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1843 Lele-ChrLele02 21708749 21711749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1843 245 511 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G59060 41.414 8.85e-41 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele02g1843 HLH 1.8e-14 No_clan