Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1833 ATGCTTACTTTTCTCATCGCAAGATTTTCTTCACTCTCCTGCAAGAGGAGGACCCAGCTTGTTTCCCTCCATCACAATGCTTCCCACATTTTCAATTCCTTTTCTTTAGTTTCGGAATTCTCTGAATCAAATCGACGGAAAGGAAAATCAGGAGAAACTAAATCTTTCACTGTTTCTTATCTCATAGACTCATTGGGCATGTCCTCCGAAGTCGCTTTCAAAGTATCCAAACGGGTTAAACTAGAAGGCCCTGATAAATCTAACTCGGTACTTGATCTTTTTAGGAGTTATGGATTCTCTGATTCGCATATCTCCAAAATTGTGGAAGAGTATCCACGAGTCCTTTTGTCGAAACCTGAGGTGACACTTTCGCCGAAGCTGATATTTTTCCGGTCCATAGGGTTTTCATGTCCTGAACTGCCAGAACTCATCGTATGTAACAGTAAACTTTTAACTTTGAGCTTGAAGAAAACTATAATTCCCCGTTATGAGGCCCTTAAGAGAGTACTAGGTGACGATGAGAAAGCAAATGTAGCTTTCAAACGCTGGGGTAGATACCATAAAGATGTAGAGAATTTACTTTCAAACATAAAGGTTTTGAGAGAATACGGAGTGCCTCAATCTTCTGTCTCCCAGCTGCTTACTCATTTTCTGAGGGCTGCGCTTATAATGCCAACAAAGTTTGTTGAACTTGTCAAGTTCGCTAAGGAGATAGGGATCGATCCAACTAAGGCTGTGTTCGTCCGCGCACTTTTTGTTTTAGCAATGACAAATAAGTCAACCTGGAAGTCAAAGCTGGATATTTATGAAAGGTGTGGCTGGTCCAGGGATGCCACTCTTTCAGCATTTAGGAAGTTTCCAACTTGCATGCTGTTGTCAGAGGAAAATATCACAAGCACAATGAAGTTTCTTGTGGATGAAATGGGTTTGCCTTTGGTAGATATAGTTAATTTCCCAACAGTTCTTGGCTATCGCTTGAAGGAAAGGATTATTCCTAGATCCTCAGTTTTTAAGATTTTGAAAACCAATGGTTTGATAAAATGTGATAAGTCCTTCAGATCCATTTTTATCTTAAGTGAGCAAAAGTTTTTGGAAAAGTTTGTAATCAGATTTCAGGAAAGTGTTCCTGAGCTGTTGGATATTTATGAAAGACGTTCCTGA 1161 0.3971 MLTFLIARFSSLSCKRRTQLVSLHHNASHIFNSFSLVSEFSESNRRKGKSGETKSFTVSYLIDSLGMSSEVAFKVSKRVKLEGPDKSNSVLDLFRSYGFSDSHISKIVEEYPRVLLSKPEVTLSPKLIFFRSIGFSCPELPELIVCNSKLLTLSLKKTIIPRYEALKRVLGDDEKANVAFKRWGRYHKDVENLLSNIKVLREYGVPQSSVSQLLTHFLRAALIMPTKFVELVKFAKEIGIDPTKAVFVRALFVLAMTNKSTWKSKLDIYERCGWSRDATLSAFRKFPTCMLLSEENITSTMKFLVDEMGLPLVDIVNFPTVLGYRLKERIIPRSSVFKILKTNGLIKCDKSFRSIFILSEQKFLEKFVIRFQESVPELLDIYERRS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1833 386 FunFam Mitochondrial transcription termination factor-like 155 375 - -
Lele02g1833 386 Pfam mTERF 258 364 IPR003690 GO:0003690|GO:0006355
Lele02g1833 386 Pfam mTERF 91 304 IPR003690 GO:0003690|GO:0006355
Lele02g1833 386 SMART mt_12 141 173 IPR003690 GO:0003690|GO:0006355
Lele02g1833 386 SMART mt_12 28 68 IPR003690 GO:0003690|GO:0006355
Lele02g1833 386 SMART mt_12 105 136 IPR003690 GO:0003690|GO:0006355
Lele02g1833 386 SMART mt_12 280 311 IPR003690 GO:0003690|GO:0006355
Lele02g1833 386 SMART mt_12 312 346 IPR003690 GO:0003690|GO:0006355
Lele02g1833 386 PANTHER CGI-12 PROTEIN-RELATED 53 370 IPR003690 GO:0003690|GO:0006355
Lele02g1833 386 Gene3D Transcription termination factor 3, mitochondrial 186 374 IPR038538 -
Lele02g1833 386 Gene3D Transcription termination factor 3, mitochondrial 58 185 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1833 Lele-ChrLele02 21626092 21627252 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele02g1833 mTERF 1.1e-30 No_clan