Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1830 ATGCTTAATTTTCTGATTGCAAGATTATCTGCGTCACACCCGTGCCAGAGGAGTAGCCATCTGGGTTTTCTCCGTCGCAATGCTTCTCACATTTTCAATTCTTTTTCTTCGGTTGTGAAATTATCTGAATCTGCTAAACCAAAGAACAAGCAAAAGCAAGAAGGACATGAATCGTTTACTGTTTCTTATCTCATGAACTCATGTGGCTTGTCCCTAAAACTAGCTGTTGAAGTATCCAAAAAGATTAATTTGAAAGACCCAGATAATCCCACCCTGATACTTAATCTATTTAAGAGCTATGGATTCTCGAATTCTCAGATATCCAAGATTGTGATAAAGTATCCATCTGTGCTTTTGACAAACCATGAGAATAACCTTTTGCCCAAGCTAAGGTTTCTCGAGTCTATAGGGTTTTCAAGGTCTGAACTCCCAGAACTCCTCTTTTATAACATTCGACTGCTAACCTGGAGCTTACGGAACCGAATAATCCCCGGTTATGAGGGCCTAAAGAGTGTGACTGATGACGATCATGAAATGCATACAATAATTAGCAAACGCAGTGGATGGAATTTTCTGCATTATGATGTGAAGAATTTGGTCCCAAACATAAATCTTCTGAGAGAGCTTGGAGTACCAAACTCTTGTCTCAACCTGCTGCTAAATAGGTTTACCAGTGTAGCATCTGTAGATCATGCAAAGTTTGTTGAACATGTGAAGTTTGCTAAAGAAATAGGAGTTAAACCCTTTAGCGCTACGTTCATCCACTCTATTCATGCGTTATCAGTGAGAAAGAAATCGACTTGGGAGTCAAAGCTGGACATCTATCAGAGGTGTGGCTGGTCCAGGGATATGACTCTTTCAGTATTCAAGAAGTTTCCATATTGTATGTTGATATCAGAGGAGAAAATCACAAGCACGATTAAGTTTCTTGGTGATGAACTGGGTTTGTCATCAAAAGATATAGTTAGATTTCCAACATATCTTGGTTATAGCTTGAAGCAGAGGATTATTCCTAGATCCTCAGTTTTTAAAGTTTTGAGAATGAAGGGTTTGATCGATAATGATCTGCCCTTTTTTGCCTTGGTTAAATTAAGTGAGGAAATATTCCTGGACAAATTTGTTTTCAGATTTCAAGAAAGTGTTCCTGAGCTGTTGAACATTTATCAAGATCAGATAACACGTTCACCTAAAGTTCTGCAGTCTTCAAGTGAGAGAGCAGAGATCGAAGAAGAAGGCAGAATACTGGTTCGCAAAGGTCAGTGGGAAGAAATCGAAGAAGAAAGCTCAGCGAAGGACTTCCCAGGCCCTGGACTTGGCATCAGAATTGTTCGCTTCTTCTATTTGTAG 1347 0.3942 MLNFLIARLSASHPCQRSSHLGFLRRNASHIFNSFSSVVKLSESAKPKNKQKQEGHESFTVSYLMNSCGLSLKLAVEVSKKINLKDPDNPTLILNLFKSYGFSNSQISKIVIKYPSVLLTNHENNLLPKLRFLESIGFSRSELPELLFYNIRLLTWSLRNRIIPGYEGLKSVTDDDHEMHTIISKRSGWNFLHYDVKNLVPNINLLRELGVPNSCLNLLLNRFTSVASVDHAKFVEHVKFAKEIGVKPFSATFIHSIHALSVRKKSTWESKLDIYQRCGWSRDMTLSVFKKFPYCMLISEEKITSTIKFLGDELGLSSKDIVRFPTYLGYSLKQRIIPRSSVFKVLRMKGLIDNDLPFFALVKLSEEIFLDKFVFRFQESVPELLNIYQDQITRSPKVLQSSSERAEIEEEGRILVRKGQWEEIEEESSAKDFPGPGLGIRIVRFFYL 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1830 448 Gene3D Transcription termination factor 3, mitochondrial 159 381 IPR038538 -
Lele02g1830 448 SMART mt_12 286 317 IPR003690 GO:0003690|GO:0006355
Lele02g1830 448 SMART mt_12 29 71 IPR003690 GO:0003690|GO:0006355
Lele02g1830 448 SMART mt_12 318 352 IPR003690 GO:0003690|GO:0006355
Lele02g1830 448 SMART mt_12 180 212 IPR003690 GO:0003690|GO:0006355
Lele02g1830 448 SMART mt_12 108 139 IPR003690 GO:0003690|GO:0006355
Lele02g1830 448 SMART mt_12 251 281 IPR003690 GO:0003690|GO:0006355
Lele02g1830 448 FunFam Mitochondrial transcription termination factor-like 158 381 - -
Lele02g1830 448 Pfam mTERF 265 369 IPR003690 GO:0003690|GO:0006355
Lele02g1830 448 Pfam mTERF 94 321 IPR003690 GO:0003690|GO:0006355
Lele02g1830 448 PANTHER CGI-12 PROTEIN-RELATED 57 375 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1830 Lele-ChrLele02 21618160 21621546 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele02g1830 mTERF 2.6e-29 No_clan