Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1828 ATGCTAAATTTTCCGTTCGTAAGATTATCGTCTTCTCTGCCATGCTGGAGGACAACCCAGTTATGGTTTCTTCGTTGCAATGCATATCACAGTTCCTATTCGTTTTCTTCTGCTGCGAAATTATCTCAATCAAATCCACCAGAACAAAACAGAGATGTAAATTTTACTTTTACGGTTTCCTATCTCATGAACACATTTGGCTTGTCCGCCGAAGTTGCTGGTAAATTATCAAAAAGGTTTGAACGAAAAGACCCAGATAAAGTACTTAGTCTTCTCAGAAGCTACCGATTCTCTGATACTCAGATATCCAAAATTGTGAAATGCTTTCCCCATTTGCTTGTAGCAAATCCTGAGAAGAGGCTTTTGCCCAAACTGAGGTTTATCCGTTCTATAGGATTTTCAGCTTCTGAACTCCCAGAACTATTCTCTACTAACCCTACGTTACTAGTTTCTAGCTTAGAGAAACGCATAATTCCCCACTATAAGGCCCTTAAAGGGGTACTCGGTGATGATTGGAAAGTAAAGAGATGTTTGAAAGGCTCAACGTGGAACGTTCGCTCCTATGGTGTAACAAATATAGTTCCAAACATAAAGGTTTTGAGAGATGAAGGAGTGCCTCAATCTTCTGTCTTTGCTCTGTTATCTAGAAGAGCAAATGTCGCATTTTTAAACCAATCAAAGTGTGTTGATAATGTCAAGTTTGTCAAGAAAACCGGAATTGAACCTTTCAAGGGTGCGTTCATTGAGGCGCTTGCAATTTTAGCACTGGTGGGTAAATCATCCTGGGAGTTGAAACTGGGTATCTATGAGAGGTTGGGCTGGTCCAGGGATGTTTCTCTTTTGGCATTCAGGAAGTTTCCAAATATCATGACCATGTCAGAGGAAAAAATCACAAACACAATGAAGTTTTTTGTGGATGAAATGGGTTTACAGTTGGAAGATATAGCTGGATGCCCAACAATTCTTGGCTATAACTTGAAGCAGAGGATTGTTCCTAGATGGACAGTAGTTAAGATTTTGAAAATGAAGGGATTAATTAAGGACAATGTTTCCCTACGTACCGTTATAATTGTGAGTGAGAAAAAGTTTCTGGAAAATTTTGTGATCAAATTTCAGGAAAGTGTTCCTCAGCTACGGAAACTCTATAGCGGTGAATTGAGATCTTTACCTGGAGTTCCGGCGTAG 1185 0.3958 MLNFPFVRLSSSLPCWRTTQLWFLRCNAYHSSYSFSSAAKLSQSNPPEQNRDVNFTFTVSYLMNTFGLSAEVAGKLSKRFERKDPDKVLSLLRSYRFSDTQISKIVKCFPHLLVANPEKRLLPKLRFIRSIGFSASELPELFSTNPTLLVSSLEKRIIPHYKALKGVLGDDWKVKRCLKGSTWNVRSYGVTNIVPNIKVLRDEGVPQSSVFALLSRRANVAFLNQSKCVDNVKFVKKTGIEPFKGAFIEALAILALVGKSSWELKLGIYERLGWSRDVSLLAFRKFPNIMTMSEEKITNTMKFFVDEMGLQLEDIAGCPTILGYNLKQRIVPRWTVVKILKMKGLIKDNVSLRTVIIVSEKKFLENFVIKFQESVPQLRKLYSGELRSLPGVPA 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1828 394 PANTHER CGI-12 PROTEIN-RELATED 55 370 IPR003690 GO:0003690|GO:0006355
Lele02g1828 394 SMART mt_12 103 134 IPR003690 GO:0003690|GO:0006355
Lele02g1828 394 SMART mt_12 280 311 IPR003690 GO:0003690|GO:0006355
Lele02g1828 394 SMART mt_12 139 171 IPR003690 GO:0003690|GO:0006355
Lele02g1828 394 SMART mt_12 312 343 IPR003690 GO:0003690|GO:0006355
Lele02g1828 394 Gene3D Transcription termination factor 3, mitochondrial 173 375 IPR038538 -
Lele02g1828 394 FunFam Mitochondrial transcription termination factor-like 153 375 - -
Lele02g1828 394 Pfam mTERF 89 241 IPR003690 GO:0003690|GO:0006355
Lele02g1828 394 Pfam mTERF 270 364 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1828 Lele-ChrLele02 21610561 21611745 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele02g1828 mTERF 7.9e-20 No_clan