LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele02g1823	ATGGAAGGATCTGGGGTGGTTACTGTGTACGGGAATGGTGCTATTGCAGAGACCAAGAAGACTCCTTTCTTTGTCAAGGTGGGTCTTGCTCAGATGCTCCGTGGCGGCCTTATCATGGATGACACTTTGTGGAAGCTCAAATCAGTGCAGCACTGTCACAGCGTCGTGACATCTCGAAATCCCCTGTCTTTATTTCTATCTAGAGCTTTTAAAAGAAAACAAGATAGGTCGCTTCTTGATAGGGGCAATCTTGGTTTAGGATCTCTGAGCGATGACGGGGGGCTCGAGAATGAGCCCACGTTTCTGGAAGGCAGCGATTCCTCAGAGGGGAACCCTGTCACAATTTGGAAAGCATCTGAGAAATCGGAAGTGTTATCTCATAGCGAAGATTCTGAGTCTTTGAGATTTCATTCTCGCCTTCTCAATACATCTTTCGAGAAGCTTCAGCCTGAGTTTCAATCTTCTATCCCTGCAACTCCAATAAAGTTTTGTGAAGAATGGGAAAAGGGCAAAGATTCTTTAGAGCGTACACCCTGCAGTTCTGCCTACATTGCACACGATACTCAATTTGGCTCTCGTTGCTCAAAAGATGAAAGAACCAAACAGAGCCTTAATACTGTTCATGGTACTTGTGAAAATGAGACTGAAACTAATGCAACTTCAGCTTCAACTTCGCCGCCACCGCCAACCACTGATATTCAAAGGAGGAGCAAGTCTCTACGTTTTGAATGTGAAATTGACTTGAGTTCCCGTGGATTTAAACAGTCACCTTATCCTACCCCATTGAAAATATCTGATGAGATGCAAACACCTGGGACTGTATACCCTTCTACATTCATAAATCAACCAAATGATAATAAGCCTCATGTTAGGTCCCAAATTTTGTATTCAGATGACTATCTCGCTAAGAACATCTCCAAGTGCAAGATACTTGAAGAAGAAGGTTTTTACCCTAAACAAGACTCATGTGAAGTGAATAGTTCTTTTAAGCATATTCAAAATGCTACTTCTACACCAAAAAGTTTTCACCCTGAACAAGACTCATGTGAGCTTAGTTCTTTTGAGCATGTTCAAAATGCTACTCCTATACCAAAAAAAGGTTCTCACCCTGAACAAGACTCAGGTGAGTTGAGTAGTTCTTTTGAGCATGTTCCTATACGCAAAAAAGGTTTTCACCCTAAACAAGACTCAGGTGAGCTGAGTAGTTCTTTTGAACATATTCCTACACTAAAAAAAGGTCAAGACTCAGGAGAGTTGAGTAGTTCTTTTGAACATGTTCTTATACCCAAAAAAGATTTTCACCCTGAATTAGACTCAGGTGAGTTGAGTAGTTCTTTTGAGTATGTTCCTACACAAAATTTTATTTTTTGCGGTGAACAAGATTCAGGTGAGTTGAGTAGTTCTTTTGAGCATGTTGAAAATGCTACTCCAAGACCAAAACAAGGGTTAAAGGAAGTTTCTTATGAAGATGAATGTAAGGAAGAAGCAAGCTTATCTTGGTTGAAGAATGCATCAGTTATTGATGCGGAGAGAAACAGTGGAAAGGAGACTTCACATAATCAGATTATTCCAAAATTATGCGAAAGTCCTGTAGACAGACCAGTCCTTGGGATTGTTCATGCTCACTGGAATGAAGAAGAAAATCCTCAGATTCCTTCTCCTAAATTTTGGTATGACAATGGCATACCAAATACAACCAATAAGTACAAGGGGGATCAGAAAGTGAACTGGCATGCAACACCATTTGAAGTGAGGTTAGAGAAGGCATTGTCTGACCAGAGTTTTATCTCTCAAAGGCGGAAAACCAAATACCTTCTGAGAATGGCAGCTGCAACCCTCAACTCATCCAAATCTGTAAAGAAGGTGGCGGTGAAGGTATACGGCCCAAACTACGCTTCTCCGAAAAGGGTGGTTATGTGTCTCATGGAGAAGCAGATTGATTTGGAAGCTGTGCTTCTCGACATCTTCAAGGGCGAGCACAAGGATCCTGACTTTCTCAAATTGCAGCCATTTGGATTGCTTCCTGTTGTTCAAGATGGAAATTATACTCTCTATGAGGAGTACAAAGGCCAAGGAACAGAGTTGCTGGGGAAGACAATAGAAGAGAGAGGACTTGTGGAACAATGGTTAGAAGTGGAGCCCAGAATTTCAATCCAGCAGCCTACAAAAGTGATAGAGGAGGGTGAAGAGAAGCTAGGGAAGGTTCTGGACATTTATGAGGAGCGGCTATCAAAAAGCAAGTACTTGGCTGGGGATTTCTTCAGCCTTGCTGATCTCAGCCACCTTCCTTATGGCCATTTTGTAACAGGCGTACTTGGAAGAAGCTCCTCCACCACTACCCCTACCCTAATTTTGCTAAGCAATAAACTAATTCTTGTTGAGATTGATCGTAATGTTACGGTTGGTCATATCAGGAGCCAATGA	2424	0.4196	MEGSGVVTVYGNGAIAETKKTPFFVKVGLAQMLRGGLIMDDTLWKLKSVQHCHSVVTSRNPLSLFLSRAFKRKQDRSLLDRGNLGLGSLSDDGGLENEPTFLEGSDSSEGNPVTIWKASEKSEVLSHSEDSESLRFHSRLLNTSFEKLQPEFQSSIPATPIKFCEEWEKGKDSLERTPCSSAYIAHDTQFGSRCSKDERTKQSLNTVHGTCENETETNATSASTSPPPPTTDIQRRSKSLRFECEIDLSSRGFKQSPYPTPLKISDEMQTPGTVYPSTFINQPNDNKPHVRSQILYSDDYLAKNISKCKILEEEGFYPKQDSCEVNSSFKHIQNATSTPKSFHPEQDSCELSSFEHVQNATPIPKKGSHPEQDSGELSSSFEHVPIRKKGFHPKQDSGELSSSFEHIPTLKKGQDSGELSSSFEHVLIPKKDFHPELDSGELSSSFEYVPTQNFIFCGEQDSGELSSSFEHVENATPRPKQGLKEVSYEDECKEEASLSWLKNASVIDAERNSGKETSHNQIIPKLCESPVDRPVLGIVHAHWNEEENPQIPSPKFWYDNGIPNTTNKYKGDQKVNWHATPFEVRLEKALSDQSFISQRRKTKYLLRMAAATLNSSKSVKKVAVKVYGPNYASPKRVVMCLMEKQIDLEAVLLDIFKGEHKDPDFLKLQPFGLLPVVQDGNYTLYEEYKGQGTELLGKTIEERGLVEQWLEVEPRISIQQPTKVIEEGEEKLGKVLDIYEERLSKSKYLAGDFFSLADLSHLPYGHFVTGVLGRSSSTTTPTLILLSNKLILVEIDRNVTVGHIRSQ	807

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele02g1823	807	MobiDBLite	consensus disorder prediction	208	236	-	-
	Lele02g1823	807	PANTHER	ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT	59	374	IPR039300	GO:0007142
	Lele02g1823	807	MobiDBLite	consensus disorder prediction	360	402	-	-
	Lele02g1823	807	ProSiteProfiles	PdxS/SNZ family profile.	25	40	IPR001852	GO:0042819\|GO:0042823
	Lele02g1823	807	SUPERFAMILY	GST C-terminal domain-like	689	771	IPR036282	-
	Lele02g1823	807	Pfam	Glutathione S-transferase, N-terminal domain	632	686	IPR004045	-
	Lele02g1823	807	Gene3D	-	697	780	-	-
	Lele02g1823	807	MobiDBLite	consensus disorder prediction	208	235	-	-
	Lele02g1823	807	MobiDBLite	consensus disorder prediction	89	109	-	-
	Lele02g1823	807	Pfam	Glutathione S-transferase, C-terminal domain	719	763	IPR004046	-
	Lele02g1823	807	Gene3D	Glutaredoxin	622	690	-	-
	Lele02g1823	807	ProSiteProfiles	Soluble glutathione S-transferase C-terminal domain profile.	699	807	IPR010987	-
	Lele02g1823	807	SUPERFAMILY	Thioredoxin-like	619	686	IPR036249	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele02g1823	Lele-ChrLele02	21575246	21582843	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele02g1823	622	775	Glutathione S-transferase Gene Family	AT2G30870	44.505	1.22e-45	161