Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1821 ATGATCAAAAGAAAAATGGAGGATGAAAATAAGGGGATGAATAACAACATGATGAGGTCATCAGAAGAAGATCATGAGGAAGAAGACGATGAAGGAGGGAAGCTTCCAGGGTTCAGATTCCATCCAACAGATGAAGAACTGGTAGGGTTTTATCTGAGAAGGAAGGTGGAGAAGAAGCCTCTTCGAATCGAACTCATCAAACACATTGATATCTACAAATACGATCCCTGGGATCTCCCAAAGGCCAGCGGGAGGCTGGGGGAGCAGGAATGGTATTTCTTCTGCAAGAGAGGGAGGAAATACAGAAACAGCATAAGGCCAAACAGGGTCACTGGCTCAGGCTTCTGGAAAGCCACTGGAATTGACAAGTCCATTTACAATAATGCCCTCACCCACTGCATTGGCCTCAAGAAGTCCCTCGTATATTATAGGGGCACTGCTGGTAAAGGCACCAAGACTGATTGGATGATGCATGAATTTCGCCTCCCTCCTAATAGTAACCCTACCACCACCACCTCCAATCATCTTCAAGAAGCTGAAGTGTGGACACTTTGCAGAATATTCAAACGAATTCCATCCTACAGAAAATACTCACGAACTTCCAAAGTTACAACAACAACAGCAGCAGCAACAAATTCCAGCAATTCTAAAACATTAGAATTTGATAAATACAACGACGACTACGACGACAAGCCTTACAGCTCGACTTGTTTCAGATCCTCGTCGTCGTCGTCATACTCTACTATTACCCATCATCTTGAAAGAAAATTACCAGTTCTTAATGATGAAAGAAGCCAGTTTTTTCTGGGTCAGTTTGCTGCTCATCATCAAGCTCCTTCATCAATGGTGACTAATAATAATAGTAATTATAACCACAGCTTCTTGAATCATCATCAGAATGTGGAAGATGTGCTTGCTAATGGTAATTGGGATGAACTCAGATCTGTCGTTCAGTTTGCTGCTGATCATTCCACTGTTTCATGA 984 0.4258 MIKRKMEDENKGMNNNMMRSSEEDHEEEDDEGGKLPGFRFHPTDEELVGFYLRRKVEKKPLRIELIKHIDIYKYDPWDLPKASGRLGEQEWYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKSIYNNALTHCIGLKKSLVYYRGTAGKGTKTDWMMHEFRLPPNSNPTTTTSNHLQEAEVWTLCRIFKRIPSYRKYSRTSKVTTTTAAATNSSNSKTLEFDKYNDDYDDKPYSSTCFRSSSSSSYSTITHHLERKLPVLNDERSQFFLGQFAAHHQAPSSMVTNNNSNYNHSFLNHHQNVEDVLANGNWDELRSVVQFAADHSTVS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1821 327 FunFam NAC domain-containing protein 35 43 193 - -
Lele02g1821 327 ProSiteProfiles NAC domain profile. 34 190 IPR003441 GO:0003677|GO:0006355
Lele02g1821 327 Coils Coil 3 23 - -
Lele02g1821 327 SUPERFAMILY NAC domain 34 189 IPR036093 GO:0003677|GO:0006355
Lele02g1821 327 Pfam No apical meristem (NAM) protein 36 162 IPR003441 GO:0003677|GO:0006355
Lele02g1821 327 MobiDBLite consensus disorder prediction 1 22 - -
Lele02g1821 327 MobiDBLite consensus disorder prediction 1 36 - -
Lele02g1821 327 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 33 279 - -
Lele02g1821 327 Gene3D NAC domain 43 194 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1821 Lele-ChrLele02 21560838 21564785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1821 17 190 NAC Transcription Factor Family AT5G39820 57.895 7.42e-73 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele02g1821 NAM 6.5e-36 No_clan