LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele02g1805	ATGTTTGAAAATATAAAAATGACCAAGGGATTCAGGACGACTGAAGCACTCTTCCAAATTCGCGAAATCCCTGAGGCAATCTACACAACTTTGCTTAGCCTTAGCCCTCGCATCTGGGTTTTGGATTTCTGTATTTGTTGTTCAAGTAGTGTGCCCTTGAGATTTTACGATTGGAATGAAGTTCATAAAGGGCATTGCAATCAAATTTTTGTCTACTTGGAAGCAAGTTTTCTGCTTTTGATTGCTGGCAAGTTTCTTCTTCACCTTGTTTGTGGTTCTTATTTTTCTAGGCAACAAAAGTTCCAACCAAAAAGAAGAGGACTGTTTCCTCTTTGGGATTTGTATGTTGGTTGGAATCATGGTTTTGACTTGCAACAGCTGTTATTGTGGCGAAATGAGCTCAATTTTGGTCTGATGTGTATTTTACAACATCCAAATGATGCGAGGCCAAAGGCGGCACAAGGTGTAACAGTTTTTCACAGTCCTCATCAACAAGGAAGCAAGAACATTGAAACCAGGCCATCCCACAACTTGATCAGCTCAAATTTGACCAAAGGAATGACAACATTAGATGAATTCAAATACGCCGATGTCAGCAAACACAGGAAGGGTTCCGAAAAGACACAAAAGGAAAAGGGAGAAGCCGATACAAAGATGTCTGGAGCGGGAAAAGAAGCCATGGAAACTCCAGAAGGAGCTGCTTTATTGAGAGACACAAGGAAAAAGGCTGTGGAAGAAGGACGAGAAGCACTGAAACTAGGTGTTTTTCGAGGAATTGATCTCCCTCGTAATATAGATGACAAAAGATATGTAGATCTCTATAAACTTTTGTTGATTGAGATGAGAGTTGGTGCTGGTATTAGGCGTGGTCAAGCACAGCACCACTCGTCTCGCATCGCACGTGCCAAACGGCGGTCAAATGACGAACCAAACAAAGTCTTGGCTGAAATTTCTCTCTCAAAAACTCTTCATGTCTTTCTGATCCCTTCTTCTTCTTCTTCTTCTTCATCTTCCTCCATGGCGAATGAGAAGGATCATTACTACGATCAGTATGATCTCAACACTTTCTATTACAACCATCACCAGAACCTCGTTCAAGGGTTTGATCATCATCATCATCATCCTTCTTCACAACAACAACAACAGGGAACGGCGAGCTTCACAGATTGCTTGAATGGTGGGTTCATGGACTATAATGTTCTCTCAAGAGCCTTTGACTTGTCTTGTTCATCAGCATCTGAAGCGATCTCCTCCTCCATTAACGGCGGCGGCGGCGATGAGCTCATCAATCTAAAGAATAAGCCACCAGCAGCCACTGCTAGTCCTACGTCGACCACTGTCGGAGATTCTCTAGTTGGCGTCAATAATTCCTCTGTGTCTAATTCATCTTCTAATAATGAAGCAGAAACAAAAGGAAATAATAATAAGAAAGAGAAAAAGGCAAGAGAACCGCGTTTTGCGTTCTTGACTAAAAGTGAGGTGGATCACTTAGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCCGTCAAGAACAGTCCTTACCCAAGGAGTTATTATAGATGCACAAGTCAGAAGTGCAATGTGAAGAAGAGAGTGGAGCGGTCATTCCAGGATCCATCAATTGTGGTGACAACATATGAAGGGCAGCACAACCACCATTGCCCGGCGACACTCCGGGGAAGCGCCAACTCCGCCATGATGTTATCATCCACGGCGATGGAGGGATCGCCTAATTCTTTTTTCGGTTCTTCGCAGCTGCGGAGGACAACGGCCATGTTTCCCCAGGAACTTCTAGCTCAGTTTCTTCCAAGTTATCAAGGTGATGATCAACTTCATCATCACCAAAACCATCCCATGTTCCACCAACAAAACCCTAATAACAGTCACCATCACCAGCAAGTCCCTCATCACGACCATGGCTTGTTGCATGACCTGTTACCTCCTTCTTCTTCATCCTTCCCTGGTAGACAACAAGAGCCATGA	1989	0.4359	MFENIKMTKGFRTTEALFQIREIPEAIYTTLLSLSPRIWVLDFCICCSSSVPLRFYDWNEVHKGHCNQIFVYLEASFLLLIAGKFLLHLVCGSYFSRQQKFQPKRRGLFPLWDLYVGWNHGFDLQQLLLWRNELNFGLMCILQHPNDARPKAAQGVTVFHSPHQQGSKNIETRPSHNLISSNLTKGMTTLDEFKYADVSKHRKGSEKTQKEKGEADTKMSGAGKEAMETPEGAALLRDTRKKAVEEGREALKLGVFRGIDLPRNIDDKRYVDLYKLLLIEMRVGAGIRRGQAQHHSSRIARAKRRSNDEPNKVLAEISLSKTLHVFLIPSSSSSSSSSSMANEKDHYYDQYDLNTFYYNHHQNLVQGFDHHHHHPSSQQQQQGTASFTDCLNGGFMDYNVLSRAFDLSCSSASEAISSSINGGGGDELINLKNKPPAATASPTSTTVGDSLVGVNNSSVSNSSSNNEAETKGNNNKKEKKAREPRFAFLTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCNVKKRVERSFQDPSIVVTTYEGQHNHHCPATLRGSANSAMMLSSTAMEGSPNSFFGSSQLRRTTAMFPQELLAQFLPSYQGDDQLHHHQNHPMFHQQNPNNSHHHQQVPHHDHGLLHDLLPPSSSSFPGRQQEP	662

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele02g1805	662	ProSiteProfiles	WRKY domain profile.	492	557	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele02g1805	662	SMART	WRKY_cls	497	556	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele02g1805	662	Pfam	WRKY DNA -binding domain	498	554	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele02g1805	662	Gene3D	WRKY domain	483	558	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele02g1805	662	MobiDBLite	consensus disorder prediction	436	470	-	-
	Lele02g1805	662	MobiDBLite	consensus disorder prediction	610	662	-	-
	Lele02g1805	662	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	312	623	IPR044810	GO:0003700
	Lele02g1805	662	MobiDBLite	consensus disorder prediction	199	231	-	-
	Lele02g1805	662	MobiDBLite	consensus disorder prediction	427	484	-	-
	Lele02g1805	662	SUPERFAMILY	WRKY DNA-binding domain	490	557	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele02g1805	662	MobiDBLite	consensus disorder prediction	199	221	-	-
	Lele02g1805	662	FunFam	WRKY transcription factor 57	483	557	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele02g1805	Lele-ChrLele02	21376586	21388935	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele02g1805	369	649	WRKY Transcription Factor Family	AT1G29860	41.077	8.36e-51	176

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Lele02g1805		WRKY	3e-25	CL0274