Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1801 ATGGATGAACCACTTCTTCTCTCCAAGAAACGAGGAGCGGTGGCAGAATCATCAAGCAGGCCAGCATCCCTAAGAGAGCTTAACTCATCTTATATCGATCTTATCACCAATGAAGAAATCATTCAGATCATTACCACACCCAAGACTAGCCCTTCTTATTTGAACCTCATAGCCAACTTGAACAGAAGAAAGAACATCGTCCATCGCTCACATTCTGCACCATCAGTTTTCACTGAAGCCAGAGGAGGAAATGATCACGATTCCTCTGACCTCAGAATTACACAAAAATCATCACCTGCAATAGTAAGGTTATCCTTTATTGGTGTCATCTTGTATGTGGCAACTGGGGTTTTAGTTTACTTGGTAAGTGGGAGTTTCAAGGGAAAATCCACTTACAAGCCTGTGGATGCTGTGTACTTCACAGTGGTAACTCTCTGCACAATAGGATATGGTGATATTGTACCAGACACAGCATTCACCAAAATATTTACCTGTGGGTTCATTCTGGTGGGTTTCGGATTTATCGGCATTCTGCTGAATGGCTTAGTCACCTACGTTTGTGATAGACAAGAGGAAATGTTACTGAGTGCCATGGATGAGAATAGATTCAATACACTAGTTAGATCATATATGGTAGACAAAGAGAAAGGAAGAATGAGGATACGAACCAAAGTGTGTCTAGCTTTGGCAGTGGTTGTTTGTTGCATTGCTATAGGAACAATTTGTGCTCGCTACCTTGAGAACCTGGATTGGCTGGACAGTTTTTATCTTGCCGTTACTTCTGTTACAACAGTGGGTTATGGGGATTATGCTTTTACTACTGAGCGGGGAAGGTGTTTTGCATCATTATGGCTGTTAGTGAGCACATTGGCTGTCGGCAGGGCCTTTCTGTACCTAACTGAATACAGTATTGACAAGAGAAATCGTACTATTGCTAAATGGGTTCTTCACAAGAAGATTACCTTGTCAGATTTAGTGGCCGCCGACCTCGACAATGATGGATCAATCAGCAAGTCTGAATTTGTCATTTATAAGCTTAAGGAGATGGGGAAGATAGCTGAGAAAGACATTCTACAAATAGGCAAACAATTTGACGCGTTGGACAGTAGTCAATGTGGCAAGATTACTCTTGCTGACCTAATGGAAACTGCCTAG 1155 0.4208 MDEPLLLSKKRGAVAESSSRPASLRELNSSYIDLITNEEIIQIITTPKTSPSYLNLIANLNRRKNIVHRSHSAPSVFTEARGGNDHDSSDLRITQKSSPAIVRLSFIGVILYVATGVLVYLVSGSFKGKSTYKPVDAVYFTVVTLCTIGYGDIVPDTAFTKIFTCGFILVGFGFIGILLNGLVTYVCDRQEEMLLSAMDENRFNTLVRSYMVDKEKGRMRIRTKVCLALAVVVCCIAIGTICARYLENLDWLDSFYLAVTSVTTVGYGDYAFTTERGRCFASLWLLVSTLAVGRAFLYLTEYSIDKRNRTIAKWVLHKKITLSDLVAADLDNDGSISKSEFVIYKLKEMGKIAEKDILQIGKQFDALDSSQCGKITLADLMETA 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1801 384 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 132 358 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele02g1801 384 Gene3D - 326 384 - -
Lele02g1801 384 FunFam Two-pore potassium channel 2-like 100 196 - -
Lele02g1801 384 SUPERFAMILY EF-hand 327 382 IPR011992 -
Lele02g1801 384 SUPERFAMILY Voltage-gated potassium channels 215 320 - -
Lele02g1801 384 FunFam Two-pore potassium channel 3 208 322 - -
Lele02g1801 384 PRINTS Two pore domain K+ channel signature 263 272 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele02g1801 384 PRINTS Two pore domain K+ channel signature 143 171 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele02g1801 384 SUPERFAMILY Voltage-gated potassium channels 97 186 - -
Lele02g1801 384 Gene3D - 98 194 - -
Lele02g1801 384 Pfam Ion channel 109 186 IPR013099 -
Lele02g1801 384 Pfam Ion channel 231 300 IPR013099 -
Lele02g1801 384 Gene3D - 195 325 - -
Lele02g1801 384 ProSitePatterns EF-hand calcium-binding domain. 329 341 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1801 Lele-ChrLele02 21352064 21354031 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1801 65 382 Ion Channels AT4G18160 52.351 5.74e-108 322