Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele02g1776 | ATGGAGGTTCCAAGTAATAACCAGCAAGCAGCTGAAGGAGGAGGAGGAGGAGGAGGGTCGTCTTCATCTCTGAAGAAGAATGGAAGAGGGAAAATAGAGATAAAGAGGATAGAGAACACAACGAATAGGCAAGTGACTTTCTGTAAGAGACGTAATGGTTTACTCAAGAAGGCTTATGAATTGTCTGTTCTTTGCGATGCTGAAGTCGCCCTCGTCGTCTTCTCTACCCGTGGCCGCTTGTACGAGTATGCCAATAACAGTGTTAGGGCAACAATTGAAAGGTACAAGAAAGCATGCGCTGCTTCCTCAAACACAGAATCTGTAGCTGAAGCTAACACCCAGTTCTATCAGCAAGAATCATCCAAGTTAAGAAGGCAGATACACGACATTCAGAATCTAAACAGGCACATTCTGGGTGAAGCTCTGAGCACATTGAGTCTGAAGGAGCTTAAAAACCTAGAGGGAAGACTAGAGAAAGGTTTAAGCAGAGTTAGATCTAGAAAGCATGAAACATTGTTCGCTGAAGTTGAGTTCATGCAAAAGCGGGAAATGGAGCTTCAAAACCATAACAATTATCTAAGAGCAAAGATAGCAGAACAGGAGAGGGCACAACAGCAGCAGCAGCAATCAAGTGTGATGCAGCAGCAGGGAAGTGTGTGTGAGTCAATGCCCTCACAATCTTATGACCGCAACTTCTTCCCTGTAAATCTCTTGGCTTCTAATAATCATCACTATTCTTCTCATAGTCAAGATCACACAGCTCTCCAGCTTGTGTAA | 777 | 0.4389 | MEVPSNNQQAAEGGGGGGGSSSSLKKNGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSTRGRLYEYANNSVRATIERYKKACAASSNTESVAEANTQFYQQESSKLRRQIHDIQNLNRHILGEALSTLSLKELKNLEGRLEKGLSRVRSRKHETLFAEVEFMQKREMELQNHNNYLRAKIAEQERAQQQQQQSSVMQQQGSVCESMPSQSYDRNFFPVNLLASNNHHYSSHSQDHTALQLV | 258 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele02g1776 | 258 | ProSitePatterns | MADS-box domain signature. | 29 | 83 | IPR002100 | GO:0003677|GO:0046983 | |
Lele02g1776 | 258 | PRINTS | MADS domain signature | 49 | 64 | IPR002100 | GO:0003677|GO:0046983 | |
Lele02g1776 | 258 | PRINTS | MADS domain signature | 64 | 85 | IPR002100 | GO:0003677|GO:0046983 | |
Lele02g1776 | 258 | PRINTS | MADS domain signature | 29 | 49 | IPR002100 | GO:0003677|GO:0046983 | |
Lele02g1776 | 258 | CDD | MADS_MEF2_like | 28 | 104 | IPR033896 | GO:0000977|GO:0045944 | |
Lele02g1776 | 258 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Lele02g1776 | 258 | FunFam | agamous-like MADS-box protein AGL11 | 39 | 122 | - | - | |
Lele02g1776 | 258 | Pfam | K-box region | 111 | 197 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Lele02g1776 | 258 | Gene3D | - | 39 | 108 | IPR036879 | GO:0003677|GO:0046983 | |
Lele02g1776 | 258 | ProSiteProfiles | MADS-box domain profile. | 27 | 87 | IPR002100 | GO:0003677|GO:0046983 | |
Lele02g1776 | 258 | ProSiteProfiles | K-box domain profile. | 113 | 203 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Lele02g1776 | 258 | PANTHER | SERUM RESPONSE FACTOR HOMOLOG | 29 | 210 | - | - | |
Lele02g1776 | 258 | SMART | madsneu2 | 27 | 86 | IPR002100 | GO:0003677|GO:0046983 | |
Lele02g1776 | 258 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Lele02g1776 | 258 | Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) | 36 | 83 | IPR002100 | GO:0003677|GO:0046983 | |
Lele02g1776 | 258 | SUPERFAMILY | SRF-like | 28 | 103 | IPR036879 | GO:0003677|GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele02g1776 | Lele-ChrLele02 | 21161756 | 21166875 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele02g1776 | 15 | 258 | MADS-box Gene Family | AT3G58780 | 69.758 | 4.37e-118 | 336 |