Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1764 ATGGACAATCATGAAAACTCTGATAACTATGTTTTGACCAATACTTCTACACCTTTCAATGTCTCTGTCTTAGATTCACGACTGTACTCAACAGCTCTCATATCTCCTCTTTCTCTCACATATTATGGACTCTGTCTTTTGAATGGAAACTACACTTTGAAGCTTCTCTTCGCGGAGATTTTGTTCTTGAATGATAAATCATATTACAGTCTTGGAAGGAGGATATTTGATGTCTACATCCAGGATAACAACACAAACACGCCTTTCTTTTTCTTGGCTTCGCATTTTGCTGCATCTCTCAGAAATGACGCATCGCAACCCACCAAATCTCTCAGCCCATCACTTGCCACGCTTGGAGCCCTGACCAATCCAGTAACTCATCCATCCCTCTATATAAATTTCTTGTTTTCTGATTGTGATTTACGGAAAATAAATGTTCTTGATTTGTTTCTGGGGATTTTGCGAATTTTGGTTGGGTGGAATCATGACCAAGTAGTTTGTGGGTTGGACTGGAGTAATAAATCAAACAAGATAGTTACTGCATCCCATGATCGTAGTTCATATGTATGGAACTTTGAAGGATCAGAATGGGTGCCAACTCTCGTTGTGCTTAGGCTAAACCGTGCTGCTCTTTGTGTTCAGTGGAGTCCAAAAGAAAATAAGTTTGCAGTTGGAAGTGGGGCCAAAACTGTTTGTATATGCTACTATGAACAGGAGAACAACTGATATGTGCCTCCCTTGCAGATTCTTCTTGCAACAACATCTACAGATGGAAAATGCCGAGTATTCTATACCTTTATAAAAGGTTGCTTCATAAATTGCTACAGGGATTCAACAACGCCAGAAACTAAGTTTGGAGAGTTAATTTTTCAGCTTGATCTCTCTGTGTCTTGGACGTTTGGTGTCAAGTGGTCACCAAAGGGCACAACTTTAACTTACGCAGATTTCCGCTTAAGTTTTGTTGATGTCTTTATGCTTTCCATTTATTGCTTCAGATTATACATTATTTATCGACAAACTAGTGATTATGTGTTTGGTATATTAATTACAGGTCATAATTCGATTATATATTTTGTTACTGACATTGGTCGTCGTTCTCCTGAGACCCAAACTGTTCCTTATCGTGATTTGCCTCTCTGTGATGTTTGTTTTATTTCTGAGAACATGGTAATTGGTGTGGGATTTGACTGCGTCCCATTGGTTTTTGCTAAAGATGAAAGAGAAAAATGGAAATTCATCAGAAGTATTGGTGAAATGAGAGCAAGATCAGCAACCTTAAAAGGATCACAGTATACCGATATATTTGGAAGATATATTGGTCGATCCAGGGATGATGTGACAGTTGAAGCAGAAAGTGGGGGTTTTCATGACAAGTGTATAAATTGTGTGTTGCCTGTCAGGGGCCGTGGTACATTGATAAAGCGTTTCAGCACATCAGGTTTGGATGGAAGAGTCATCATATGGGATTTGGAGAAGCAGCAAGATCTTGCTGCATACATTCTAGAACCCAAACAAGCATCCATTATCACCGTGCGTCTCTGCAAAATGCTATCCGCACTACAATCTCCTCGCTCCCTCTCTCGCTTCCCTCTCTTCCGTTCCTCAAAGCCCTTTCTCTTCCATTCTTCTTCTCACGTTCTCCCCAATGCTTCCCTCACCGACCAATCTACCACCACCACTTCAACCTCCTCACCCCCACAATCCCAAATCCTCACCACGCGCCATTCCCTCCTCTCCCGCCACATCACTGCCACGGAGGTTGCCGAGTCCTATCTAGCTCGCCTCCGACTCACCGAGACCCAACTCAATTCCTTCCTCCACGTGTCCGATTCGGTTCTCCGAGAAGCTCATGACTTGGATAGGAGAATCGCCAGCAATGAGGAAGTTGGCCCTCTGGCTGGGGTGCTTGTTGGGGTTAAGGATAATCTGTGTACGGCGGATATGCCTTCCACCGGTGGGTCCCGCATTCTGGAGGGGTACCAGCCACCGTTCGATGCTACGGCGGTGAAGAGAGTGAAGGACCTCGGAGGGATTGTCGTCGGAAAAACCAATATGGATGAGTTCGGTATGGGTAGTACCACCGAAGGCTCTGCGTTTCAGGTGACCGCCAACCCATGGGATATTTCTAGGGTGCCGGGAGGATCATCCGGAGGCTCAGCAGCTGCAGTTTCTGCCAGGCAGTGCATGGTATCACTCGGAAGTGATACTGGTGGAAGTGTGAGGCAGCCAGCATCATTTTGTGGAGTGGTAGGATTGAAGCCAACATATGGACGTGTTTCACGATTTGGACTTATGGCATATGCATCATCACTTGATGTGGTTGGCTGTTTTGGTTCCTCGGTTGCAGATACTGGGATTCTCCTTCATGCAATTGCTGGTCACGATAGGTTTGATGCTACTACAAGTAATCAAGATGTGCCCAATTTTGTATCTCATTTTGTCTCAGCAAGTTCCTTGGAAAGTAAGCCCTTGAAGGGACTGAGAATTGGTCTGATTCGTGAAACTCTTGAAGATGGCGTTGAAACTGGAGTAGCTTCTGCAATTCGTGCTGCTGCTTTGCATTTTGAGGAATTAGGATGCTCTGTTAATGAGGTCTCACTGCCATCCTTTTCCCTTGGGTTGCCAGCCTACTACATCCTTGCATCATCAGAATCTTCTTCCAACTTGTCTCGCTATGATGGTATTAGATACGGGAAACAAGTTTTTGCCAATGAGCTGAGCTCTCTTTATGGAGATTCCCGTGCGGAAGGTTTTGGTTCTGAGGTCAAAATGAGAATTTTGATGGGAACATATGCCCTTTCAGCTGGATATTATGATGCATACTACAAACGTGCACAGCAGGTCAGGACTATAATTAGGAATAGCTTCAAGGAGGCATTAAGTCCAAATGATGTCCTAATTTCACCTGCAGCTCCATCACCTGCTTATAAGATTGGTGAAAAGAAAAAAGATCCTTTGGCAATGTATTCCGGTGACATCATGACTGTAAATGTTAACCTAGCTGGGCTACCTGCTCTGGTTTTGCCATGTGGATTTGTTGAGGGGGGCAGTGCTGGCCTTCCTGTTGGTCTGCAAATGATAGGTTCAGCATTTTGTGAGGGAGAGCTGCTGAGAGTGGGACATATCTTTGAGCAAACTCTTGAAAACTGTAACTTTGTTCCACCAATCATAGCCGATAACTGA 3183 0.4417 MDNHENSDNYVLTNTSTPFNVSVLDSRLYSTALISPLSLTYYGLCLLNGNYTLKLLFAEILFLNDKSYYSLGRRIFDVYIQDNNTNTPFFFLASHFAASLRNDASQPTKSLSPSLATLGALTNPVTHPSLYINFLFSDCDLRKINVLDLFLGILRILVGWNHDQVVCGLDWSNKSNKIVTASHDRSSYVWNFEGSEWVPTLVVLRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNXYVPPLQILLATTSTDGKCRVFYTFIKGCFINCYRDSTTPETKFGELIFQLDLSVSWTFGVKWSPKGTTLTYADFRLSFVDVFMLSIYCFRLYIIYRQTSDYVFGILITGHNSIIYFVTDIGRRSPETQTVPYRDLPLCDVCFISENMVIGVGFDCVPLVFAKDEREKWKFIRSIGEMRARSATLKGSQYTDIFGRYIGRSRDDVTVEAESGGFHDKCINCVLPVRGRGTLIKRFSTSGLDGRVIIWDLEKQQDLAAYILEPKQASIITVRLCKMLSALQSPRSLSRFPLFRSSKPFLFHSSSHVLPNASLTDQSTTTTSTSSPPQSQILTTRHSLLSRHITATEVAESYLARLRLTETQLNSFLHVSDSVLREAHDLDRRIASNEEVGPLAGVLVGVKDNLCTADMPSTGGSRILEGYQPPFDATAVKRVKDLGGIVVGKTNMDEFGMGSTTEGSAFQVTANPWDISRVPGGSSGGSAAAVSARQCMVSLGSDTGGSVRQPASFCGVVGLKPTYGRVSRFGLMAYASSLDVVGCFGSSVADTGILLHAIAGHDRFDATTSNQDVPNFVSHFVSASSLESKPLKGLRIGLIRETLEDGVETGVASAIRAAALHFEELGCSVNEVSLPSFSLGLPAYYILASSESSSNLSRYDGIRYGKQVFANELSSLYGDSRAEGFGSEVKMRILMGTYALSAGYYDAYYKRAQQVRTIIRNSFKEALSPNDVLISPAAPSPAYKIGEKKKDPLAMYSGDIMTVNVNLAGLPALVLPCGFVEGGSAGLPVGLQMIGSAFCEGELLRVGHIFEQTLENCNFVPPIIADN 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1764 1060 SUPERFAMILY Amidase signature (AS) enzymes 570 1055 IPR036928 -
Lele02g1764 1060 Gene3D - 157 490 IPR015943 GO:0005515
Lele02g1764 1060 SMART WD40_4 150 191 IPR001680 GO:0005515
Lele02g1764 1060 SMART WD40_4 445 489 IPR001680 GO:0005515
Lele02g1764 1060 SMART WD40_4 200 235 IPR001680 GO:0005515
Lele02g1764 1060 TIGRFAM gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 576 1048 IPR004412 GO:0006412|GO:0030956|GO:0050567
Lele02g1764 1060 Gene3D Amidase signature (AS) domain 567 1051 IPR036928 -
Lele02g1764 1060 ProSitePatterns Trp-Asp (WD) repeats signature. 178 192 IPR019775 -
Lele02g1764 1060 Hamap Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 573 1048 IPR004412 GO:0006412|GO:0030956|GO:0050567
Lele02g1764 1060 ProSiteProfiles Trp-Asp (WD) repeats profile. 159 200 IPR001680 GO:0005515
Lele02g1764 1060 SUPERFAMILY WD40 repeat-like 152 494 IPR036322 GO:0005515
Lele02g1764 1060 PANTHER TRANSAMIDASE 558 1050 IPR000120 GO:0003824
Lele02g1764 1060 ProSitePatterns Amidases signature. 713 744 IPR020556 -
Lele02g1764 1060 Pfam Amidase 586 1037 IPR023631 -
Lele02g1764 1060 Pfam Malectin domain 9 83 IPR021720 -
Lele02g1764 1060 Gene3D - 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1764 Lele-ChrLele02 21061341 21074074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1764 609 1045 Acyl Lipid Metabolism Gene Families AT5G64440 29.268 1.06e-44 170
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g1764 02 21061341 21074074 Lele02g1764 02 21061341 21074074 ECH
Lele02g1764 02 21061341 21074074 Lele03g1460 03 8911916 8923544 hybridization
Lele02g1764 02 21061341 21074074 Lele04g1736 04 21892760 21900069 hybridization