Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1741 ATGGCTCCCGGTTTTGTATTCGAAGCTCCCAGTGACGAAGAAATCGAGCGCTCTGACTCTCAAGACGAAGAACAGGAACAAGGCCAAGAAGATGAAGCAGAGGAGCAGAGTGATTATGATAATGACGATGACGATGAAGAAGAAGGAGAAGAAGAAAGAGCACGAGTCTCGAATAAGAAATCTCAATCCCCATGGGACTTCGCGAAGTACTCTGAGTCCGTCGCAGAGGAACATGCCCGGCGAAGCACAACCTCAGTGGATCAGAAAATTGCCAAAGCCATTAAAGAACGCTCCACTGAGCTCAGAAAGCTCGTCGAAGACGACCAGGATAGCTCGGAGTCCGAACCCGACAAACAAGAGGATTATAGACCAGAAGAGGAAGAAGATGAAGGTGGAAATGTAGGTGAGAGCAAGTCTTTCTTCGCGCCATCTGACGGAGCTTCATTCCATGCTGATTCATTCATGGAGCTTAATTTGTCGCGTCCTTTGCTCCGGGCTTGTGAGGCCTTAGGATACGTTAAACCGACACCAATTCAGGCAGCGTGTATACCACTTGCATTGACCGGTCGTGATATATGTGGAAGTGCCATTACCGGTTCTGGGAAGACAGCTGCATTCTCACTGCCTACTCTGGAGAGGCTTCTGTATCGTCCAAAACGTGTGCAGGCCATTAGAGTCCTCATTCTTACTCCAACCAGAGAATTGGCGGTCCAAGTTCACAGTATGATAGAGAAGCTTGCTCAGTTTACTGATATAAGATGTTGCCTGGTCGTTGGCGGTCTGTCTACAAAGGTGCAAGAGGTGGCCTTGAGATCTATGCCGGATATTGTTGTTGCTACTCCAGGACGCATGATAGATCATTTACGCAATTCAATGTCAGTGGATTTAGATGATCTTGCTGTTCTAATCCTTGATGAGGCAGATCGTCTATTGGAGCTTGGTTTTAGTGCTGAAATTCATGAACTTGTTCGCACGTGTCCCAAAAAAAGGCAGACCATGCTATTTTCAGCTACCATGACTGAGGAGGTTGATGAACTTATTAAACTTTCTCTAACAAAACCCTTGCGTCTTTCTGCTGACCCATCTGCAAAACGGCCAGCAACCTTGACCGAGGAGGTGGTTAGAATGAGAAGAATGCGGGAAATGAATCAGGAAGCAGTTCTTCTTGCATTGTGTTCCAAAACTTTTATATCTAAAGTGATCATATTCAGTGGAACAAAACAAGCTGCGCATAGGTTGAAGATTATATTTGGATTAGCTGGTTTGAAAGCTGCTGAGCTTCATGGAAATCTTACTCAGGCCCAGCGTCTTGAAGCTTTAGAGCAGTTTAGGAAGCAGCAAGCCGACTTTTTGATTGCCACTGATGTGGCTGCTCGAGGTCTAGATATTATCGGTGTTCAAACAGTCATCAACTTTGCATGTCCACGAGATCTTACCAGTTATGTTCATCGAGTAGGACGTACTGCAAGAGCTGGCAGAGAAGGATGTGCTGTCACGTTTGTGACTGACAATGACCGGTCACTTTTAAAAGCAATTGCAAAGAGGGTGGGTTCAAAGCTGAAGAGCCGTATTGTTGCAGAACAATCTGTAATTAAGTGGTCTCAAACTATTGAGCAAATGGAGGATGAAATTGCTGCAATTCTTGATGAAGAGAGGGAGGAAAGAGCCCTCAGGAAAGCTGAAATGGAGGCAACAAAGGCTGAAAACATGATTGAGCATAGGGAAGAGATATATTCCCGGCCCAAAAAAACTTGGTTTATGACAGGGAAGGAGAAGAAGCTTGCTGCAAAAGTAGCCCAGACGTCTAACGGAAAGGAAAAGAGCCCTGGGAAGGAAGTAATTAGTGCTGAACAAGCCGAAGCCTTAAGAAAGAAGGAAAAGCGGAAGCGAGAATGGGAAAAAAATTTGCCCAGGAAACAGCGCCGAAAATTGGAAGCTGCTAGAGAGATGTTGGAGGATGAAGGTCATTTTGAGAAGCCAGAAGCTAACGAGAAAAATAAGAAAGAAAAGACTGGAACATCACTTGTTGATGTGGCATACCGACGAGCGAAAGCAGTTAAAGCCGTGAAGAAGGCTCTAGATGCTGGCAAAATTGTGAAGAAGGGTAAGAAGAAATCGGATCATTCTTCACGAAAGACTCCTTCAAGGACAGAGGAAATGCGGGAGCTTTTCCAAACTGATATGAGTGAGAAAAAACAAAAAAGGGTTGGTGGACCAGGGAAGAAGTCCAAGAGTTCATTCAAAAGCAAGTCAAGGTATAAGCGCAGGCATGCAGACCCATATGTAGGAAACAGTGAATATGACCGATGTGGGACTTGGTGGATAGAGTTGCAAATACCTTCTCACTCTTCTCATGTCACCATGAATCTTCTCTACTCAATTTTGTAA 2388 0.4502 MAPGFVFEAPSDEEIERSDSQDEEQEQGQEDEAEEQSDYDNDDDDEEEGEEERARVSNKKSQSPWDFAKYSESVAEEHARRSTTSVDQKIAKAIKERSTELRKLVEDDQDSSESEPDKQEDYRPEEEEDEGGNVGESKSFFAPSDGASFHADSFMELNLSRPLLRACEALGYVKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERLLYRPKRVQAIRVLILTPTRELAVQVHSMIEKLAQFTDIRCCLVVGGLSTKVQEVALRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIHELVRTCPKKRQTMLFSATMTEEVDELIKLSLTKPLRLSADPSAKRPATLTEEVVRMRRMREMNQEAVLLALCSKTFISKVIIFSGTKQAAHRLKIIFGLAGLKAAELHGNLTQAQRLEALEQFRKQQADFLIATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGCAVTFVTDNDRSLLKAIAKRVGSKLKSRIVAEQSVIKWSQTIEQMEDEIAAILDEEREERALRKAEMEATKAENMIEHREEIYSRPKKTWFMTGKEKKLAAKVAQTSNGKEKSPGKEVISAEQAEALRKKEKRKREWEKNLPRKQRRKLEAAREMLEDEGHFEKPEANEKNKKEKTGTSLVDVAYRRAKAVKAVKKALDAGKIVKKGKKKSDHSSRKTPSRTEEMRELFQTDMSEKKQKRVGGPGKKSKSSFKSKSRYKRRHADPYVGNSEYDRCGTWWIELQIPSHSSHVTMNLLYSIL 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1741 795 MobiDBLite consensus disorder prediction 1 141 - -
Lele02g1741 795 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 387 531 IPR001650 -
Lele02g1741 795 Gene3D - 114 359 IPR027417 -
Lele02g1741 795 MobiDBLite consensus disorder prediction 110 132 - -
Lele02g1741 795 CDD SF2_C_DEAD 385 501 - -
Lele02g1741 795 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 21 710 - -
Lele02g1741 795 MobiDBLite consensus disorder prediction 71 109 - -
Lele02g1741 795 SMART ultradead3 171 372 IPR014001 -
Lele02g1741 795 MobiDBLite consensus disorder prediction 711 736 - -
Lele02g1741 795 Pfam DEAD/DEAH box helicase 176 346 IPR011545 GO:0003676|GO:0005524
Lele02g1741 795 MobiDBLite consensus disorder prediction 620 672 - -
Lele02g1741 795 SMART helicmild6 407 492 IPR001650 -
Lele02g1741 795 Coils Coil 615 642 - -
Lele02g1741 795 MobiDBLite consensus disorder prediction 697 765 - -
Lele02g1741 795 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 224 512 IPR027417 -
Lele02g1741 795 MobiDBLite consensus disorder prediction 737 755 - -
Lele02g1741 795 Pfam Helicase conserved C-terminal domain 388 492 IPR001650 -
Lele02g1741 795 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 152 180 IPR014014 GO:0003724
Lele02g1741 795 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 183 357 IPR014001 -
Lele02g1741 795 MobiDBLite consensus disorder prediction 15 51 - -
Lele02g1741 795 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 303 311 IPR000629 -
Lele02g1741 795 CDD DEADc_DDX27 163 358 - -
Lele02g1741 795 Coils Coil 530 577 - -
Lele02g1741 795 Gene3D - 375 603 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1741 Lele-ChrLele02 20900458 20907910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1741 140 509 Eukaryotic Initiation Factors Gene Family AT3G13920 33.512 3.12e-52 186