Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1716 ATGGAAGGTATTATTGTGAGAAGAGTAATTCCCTCAGATAATAGTTGCCTCTTCAATGCAATTGGGTATGTTATGGATCATGATAAAACTAAAGCTTCTGAGTTGAGACAGGTTATAGCTGCAACAGTAGCAAGTGATCCAGTGAAATACTGTGAAGCATTTCTTGGAAAGCCAAATGCAGATTATTGTGCCTGGATCCTTGACTCAGAGAAATGGGGAGGTGCCATTGAGCTTTCAATATTAGCCGATTATTATGAACGTGAAATTGGAGCATACGATATCCAAACAACACGATGCGACGTGTATGGTCAGGACAGAAAGTATTCTGAAAGAGTCATGCTGATTTATGATGGTCTCCATTACGACGCCTTAGCCACGTCTCCCTTTGAGGGTGCCCCTGAGGAGTTTGATCAGACCATATTTCTTGTACAGAAAGACAGGAGCATTGGACCTGTTGAGAGGCTTGCTCTTGATTTTGCTAAGGACCAACAAAGGAAACGAAGCTATACCGACACATCCAACTTCACACTACGCTGTGGGGTATGCCAAATCGGCGTAGTTGGTCAGAAGGAGGCAGTGGAGCATGCACAAGCAACTGGTCATGTTAACTTCCAAGAATATAGATGA 627 0.4322 MEGIIVRRVIPSDNSCLFNAIGYVMDHDKTKASELRQVIAATVASDPVKYCEAFLGKPNADYCAWILDSEKWGGAIELSILADYYEREIGAYDIQTTRCDVYGQDRKYSERVMLIYDGLHYDALATSPFEGAPEEFDQTIFLVQKDRSIGPVERLALDFAKDQQRKRSYTDTSNFTLRCGVCQIGVVGQKEAVEHAQATGHVNFQEYR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1716 208 Gene3D - 1 173 - -
Lele02g1716 208 ProSiteProfiles OTU domain profile. 5 127 IPR003323 -
Lele02g1716 208 Pfam OTU-like cysteine protease 12 98 IPR003323 -
Lele02g1716 208 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 6 206 IPR039138 -
Lele02g1716 208 SUPERFAMILY Cysteine proteinases 7 125 IPR038765 -
Lele02g1716 208 FunFam ubiquitin thioesterase OTU1 1 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1716 Lele-ChrLele02 20697744 20700816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1716 1 208 C2H2 Transcription Factor Family AT1G50670 82.212 2.92e-128 358