Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1714 ATGGGTCTGTGTTTGGGTAAAAGCAAAGATTCAGAGCGAGAATATAATGGACACAGACCAGTTGGGGCAACTGCCGGAGCTCCGAATTACAAAACCCATGAACCCACTCCTCATCATCAGCCGTATCAATTACCCGAAAAGCCCTCTTCTAGGGCTTCGCCAAACCCTAATAAACTCGGCCACAATGCTATTCTGGGGAAGCAATTCGAAGATGTGAAGCAATTTTACAAGACTGGGAAAGAACTGGGAAGGGGTCAATTTGGTGTGACCTATCTCTGCACTGAGATTTCAACTGGTAGACAGTACGCTTGCAAGTCAATCTCGAAGAGGAAGCTTACGAGCAGAGCTGATAGAGAGGATATGAAGAGGGAGATTCAGATTATGCAGCATTTGAGTGGGCAACCCAATATTGTGGAGTTCAAAGGTGCTTATGAAGATAGTCAATCTGTTCATCTTGTGATGGAGCTGTGTGCCGGTGGTGAGCTCTTTGATCGGATTATTGCAAAGGGACATTACAGTGAAAGAGCAGCTGCTTCTATATGTAGACAGATTGTTAATGTTGTTCATATCTGTCACTTTATGGGTGTGATTCATAGAGATCTCAAGCCCGAGAATTTCTTGTTGTCCAGTAAGGATGAAAATGCACTTCTCAAAGCTACAGATTTCGGTTTGTCCGTTTTCATCGAGGAAGGAAAGGTTTATCACGATATAGTTGGGAGTGCTTATTATGTTGCTCCTGAAGTCCTAAAGCGCAAATATGGGAAGGAGATCGACATATGGAGTGCCGGAGTGATACTGTATATCTTACTCAGCGGTGTACCTCCATTTTGGGCTGAGAATGAAAGGGGAATATTTGATGCCATTTTGGAAGGTCATATTGATTTCGAAAGTAAACCATGGCCAAGCATATCAAACAGTGCCAAGGATCTTGTTCGTAAGATGCTGACACAAGACCCGAAAAAGCGCATTACTTCTGCCCAGGTTCTTGAGCATCCATGGATTAGAGAAGATGGAAATGCATCTGACAAGCCGATAGATAGTGCGGTCCTTTCCAGAATGAAGCAATTCAGAGCAATGAACAAGCTAAAGAAACTTGCCCTGAAGGTCATTGCGGAGAATCTTTCTGAAGAAGAGATTCAAGGGTTGAAGGCAATGTTTATGAATATGGACACCGACAAGAGCGGTACGATCACCTATGAGGAACTAAAGGAGGGATTGCAGAGACTTGGTTCAAAGCTCACAGAGGCTGAAGTGAAGCAGCTTATGGAAGCTGCTGATGTAGATGGAGACGGCACTATTGACTACATAGAGTTTATCACTGCCACAATGCATCGACACAGATTAGAAAGAGATGAGCATCTCTTCAAAGCTTTCCAGTATTTTGATAAGGATCACAGTGGGTTCATAACAGTAGATGAACTTGAAACAGCCATGAAAGAATATGGCATGGGAGATGAAGGCACAATCAAGGAAATCATATCAGAAGTTGACACAGATAATGATGGTAGAATCAATTATGAAGAATTCTGCACAATGATGAGAAGTGGAAACCCACAAGGCAAGTTATTTTGA 1572 0.4294 MGLCLGKSKDSEREYNGHRPVGATAGAPNYKTHEPTPHHQPYQLPEKPSSRASPNPNKLGHNAILGKQFEDVKQFYKTGKELGRGQFGVTYLCTEISTGRQYACKSISKRKLTSRADREDMKREIQIMQHLSGQPNIVEFKGAYEDSQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRQIVNVVHICHFMGVIHRDLKPENFLLSSKDENALLKATDFGLSVFIEEGKVYHDIVGSAYYVAPEVLKRKYGKEIDIWSAGVILYILLSGVPPFWAENERGIFDAILEGHIDFESKPWPSISNSAKDLVRKMLTQDPKKRITSAQVLEHPWIREDGNASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIQGLKAMFMNMDTDKSGTITYEELKEGLQRLGSKLTEAEVKQLMEAADVDGDGTIDYIEFITATMHRHRLERDEHLFKAFQYFDKDHSGFITVDELETAMKEYGMGDEGTIKEIISEVDTDNDGRINYEEFCTMMRSGNPQGKLF 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1714 523 ProSiteProfiles EF-hand calcium-binding domain profile. 377 412 IPR002048 GO:0005509
Lele02g1714 523 SUPERFAMILY EF-hand 373 513 IPR011992 -
Lele02g1714 523 ProSitePatterns EF-hand calcium-binding domain. 390 402 IPR018247 -
Lele02g1714 523 PANTHER SERINE/THREONINE-PROTEIN KINASE 70 509 - -
Lele02g1714 523 Gene3D Transferase(Phosphotransferase) domain 1 162 342 - -
Lele02g1714 523 SUPERFAMILY Protein kinase-like (PK-like) 76 341 IPR011009 -
Lele02g1714 523 Gene3D Phosphorylase Kinase; domain 1 77 161 - -
Lele02g1714 523 ProSiteProfiles EF-hand calcium-binding domain profile. 449 484 IPR002048 GO:0005509
Lele02g1714 523 FunFam calcium-dependent protein kinase 1 162 341 - -
Lele02g1714 523 ProSiteProfiles Protein kinase domain profile. 76 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1714 523 ProSitePatterns EF-hand calcium-binding domain. 497 509 IPR018247 -
Lele02g1714 523 MobiDBLite consensus disorder prediction 1 61 - -
Lele02g1714 523 ProSiteProfiles EF-hand calcium-binding domain profile. 489 519 IPR002048 GO:0005509
Lele02g1714 523 Coils Coil 399 419 - -
Lele02g1714 523 FunFam Calcium-dependent protein kinase 1 342 517 - -
Lele02g1714 523 ProSitePatterns EF-hand calcium-binding domain. 462 474 IPR018247 -
Lele02g1714 523 SMART efh_1 381 409 IPR002048 GO:0005509
Lele02g1714 523 SMART efh_1 488 516 IPR002048 GO:0005509
Lele02g1714 523 SMART efh_1 417 445 IPR002048 GO:0005509
Lele02g1714 523 SMART efh_1 453 481 IPR002048 GO:0005509
Lele02g1714 523 CDD EFh 453 514 IPR002048 GO:0005509
Lele02g1714 523 ProSiteProfiles EF-hand calcium-binding domain profile. 413 448 IPR002048 GO:0005509
Lele02g1714 523 CDD EFh 382 441 IPR002048 GO:0005509
Lele02g1714 523 ProSitePatterns EF-hand calcium-binding domain. 426 438 IPR018247 -
Lele02g1714 523 CDD STKc_CAMK 75 333 - -
Lele02g1714 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Lele02g1714 523 Pfam EF-hand domain pair 382 442 IPR002048 GO:0005509
Lele02g1714 523 Pfam EF-hand domain pair 452 514 IPR002048 GO:0005509
Lele02g1714 523 Pfam Protein kinase domain 76 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1714 523 SMART serkin_6 76 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1714 523 FunFam Calcium-dependent protein kinase 1 78 161 - -
Lele02g1714 523 Gene3D - 343 516 - -
Lele02g1714 523 ProSitePatterns Protein kinases ATP-binding region signature. 82 105 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1714 Lele-ChrLele02 20675469 20679187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1714 1 519 EF-hand Containing Proteins AT3G20410 75.094 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele02g1714 Pkinase 2.1e-76 CL0016