Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1713 ATGGTTGAATTGGAAGTTCAGCTTCCCACTCCCTTTGATCCGTTCTTAGAAGACAAAGAATCGGATGCTCCTGGAACCAAAGGGTATGTGCATGTCAGGATTCAGCAGAGGAATGGAAAAAAGAGTCTGACCACAGTTCAAGGACTGAAGAAAGAGTTCAGCTACGAGAAGATCCTCAAGGACCTCAAGAAGGAGTTCTGCTGCAACGGCAACGTTGTGCAGGACAAGGAGCTGGGCAAGATCATTCAGCTTCAGGGTGATCAGCGCAAGAACGTCTCTCAATTCCTGGTTCAGTTTGATGAGTGA 306 0.4739 MVELEVQLPTPFDPFLEDKESDAPGTKGYVHVRIQQRNGKKSLTTVQGLKKEFSYEKILKDLKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQFDE 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1713 101 Pfam Translation initiation factor SUI1 27 98 IPR001950 GO:0003743|GO:0006413
Lele02g1713 101 SUPERFAMILY eIF1-like 6 98 IPR036877 GO:0003743|GO:0006413
Lele02g1713 101 CDD eIF1_SUI1 28 98 IPR005874 GO:0003743
Lele02g1713 101 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 8 97 - -
Lele02g1713 101 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 100 IPR001950 GO:0003743|GO:0006413
Lele02g1713 101 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 6 99 IPR005874 GO:0003743
Lele02g1713 101 PIRSF Transl_init_SUI1_Euk 1 101 IPR005874 GO:0003743
Lele02g1713 101 FunFam Eukaryotic translation initiation factor SUI1 2 100 - -
Lele02g1713 101 Gene3D - 2 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1713 Lele-ChrLele02 20669986 20670420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1713 1 98 Eukaryotic Initiation Factors Gene Family AT5G54940 81.633 1.27e-57 171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g1713 02 20669986 20670420 Lele02g1713 02 20669986 20670420 ECH
Lele02g1713 02 20669986 20670420 Lele03g1425 03 8646798 8653107 hybridization
Lele02g1713 02 20669986 20670420 Lele04g1696 04 21584965 21585303 hybridization