LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele02g1709	ATGAATAGTCATAACGACGAGGTGAATAATGAGCCTGGGCTGCCTTCGATTACCGGCGTTGGCGAAGGAGGTGGTGGTGGTGGTGAGGGTGCCGGTGGGGCAGCGGCAGCTGCCGAGGAGGTTGTCCTCAAGAAGGGTCCATGGACGGCAGCGGAGGATGCGGTGCTTATTGGTTATGTGACGAAGCATGGTGAAGGGAATTGGAATGCGGTGCAGAGGAATACGGGGTTGGCTCGATGTGGCAAGAGCTGTAGGTTGAGATGGACGAACCATTTGCGTCCAAATCTGAAGAAAGGCGCTTTCTCTCCTGAGGAAGAGAAGCTCATTCTTGAGCTTCATGCTCAGTTTGGCAACAAATGGGCTCGAATGGCCACTCTATTACCTGGGCGAACAGATAATGAAATCAAGAACTACTGGAACACTAGGGTGAAGCGCCGGCAAAGACAAGGCCTGCCACTTTATTCCAGTGATTCTGATCAGCCAACCACATCTACAGCTCCGGCCACCTCTGGTACACGACCAGTCACCGGATCCACTGCTACTAAATTGGATTATTATAATCAGAACCGCTATCCTCTGTCTTCACTCCATACAGGATCCTCTTATTCTACTCATACCCCTTTCTTGGACCCCAATTCTCTTTCTTCTTCTTCCTTCTTTACTTTCCCCTCTCAACAGCCTACTTCTTCATTACACATCACCCCACTCCAATCCAAGCGTTGCCGTACCACTTTTTCCCTCCCAGATGCACCTTTAACTACCCGATTGGTGGATCTTGATGGCCTCAACTTTCCAGCCCAATTTAATTCAAGTTCATGTCAAATCTTCCAGACCCCATTTGAGTTATCATCTTCATCAGTTCCTGGGGTTCCAAGCCCATCTTCCATTTTGTCAACCAAAATGGAGCTCCCTTCAAACCAATTTTCCCAATCCAATAATGAACTCCTGGATGATCTTCTTCTGGAAGCTCAAGTATTGGTTTCTGGCCAGAATTCCAAGTATCGAACCTGTTCGAGTTTCAGTGAAGGAAATGGTTTATTAGACGGATGTATTAGCTTGGATGATATGCCTCAAAGCTCCGTTTACTGGTCTTCAGGACTGAAACCAAAGTCAGAACCATCAGACATGAATGAGCTATCCACACTGATCTCTGGAATGCCTTCAACCATTCAGGTTCCTGAATGGCACAATGAAATTGCTTCACCAGCCTCCAATAATGTTCAATCTTCTGGTGCTATTGTGGCGGATGATAATTTTGATCTTGATTTCAAGCCTACTGCTTCGTTGATTCCTGTCAACACCACAACAAACCCTAATGAAAACCCTGGTGGCTTCTTCTCATGGGACACCTTACCTGGACTCTGCTGA	1368	0.4722	MNSHNDEVNNEPGLPSITGVGEGGGGGGEGAGGAAAAAEEVVLKKGPWTAAEDAVLIGYVTKHGEGNWNAVQRNTGLARCGKSCRLRWTNHLRPNLKKGAFSPEEEKLILELHAQFGNKWARMATLLPGRTDNEIKNYWNTRVKRRQRQGLPLYSSDSDQPTTSTAPATSGTRPVTGSTATKLDYYNQNRYPLSSLHTGSSYSTHTPFLDPNSLSSSSFFTFPSQQPTSSLHITPLQSKRCRTTFSLPDAPLTTRLVDLDGLNFPAQFNSSSCQIFQTPFELSSSSVPGVPSPSSILSTKMELPSNQFSQSNNELLDDLLLEAQVLVSGQNSKYRTCSSFSEGNGLLDGCISLDDMPQSSVYWSSGLKPKSEPSDMNELSTLISGMPSTIQVPEWHNEIASPASNNVQSSGAIVADDNFDLDFKPTASLIPVNTTTNPNENPGGFFSWDTLPGLC	455

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele02g1709	455	MobiDBLite	consensus disorder prediction	151	181	-	-
	Lele02g1709	455	FunFam	Transcription factor GAMYB	100	146	-	-
	Lele02g1709	455	Pfam	Myb-like DNA-binding domain	98	141	IPR001005	-
	Lele02g1709	455	Pfam	Myb-like DNA-binding domain	45	92	IPR001005	-
	Lele02g1709	455	FunFam	MYB-related transcription factor	44	97	-	-
	Lele02g1709	455	SMART	sant	44	94	IPR001005	-
	Lele02g1709	455	SMART	sant	97	145	IPR001005	-
	Lele02g1709	455	CDD	SANT	47	92	IPR001005	-
	Lele02g1709	455	Gene3D	-	100	146	-	-
	Lele02g1709	455	ProSiteProfiles	Myb-like domain profile.	40	92	IPR001005	-
	Lele02g1709	455	PANTHER	TRANSCRIPTION FACTOR MYB33-RELATED	28	412	-	-
	Lele02g1709	455	MobiDBLite	consensus disorder prediction	1	32	-	-
	Lele02g1709	455	MobiDBLite	consensus disorder prediction	149	181	-	-
	Lele02g1709	455	CDD	SANT	100	141	IPR001005	-
	Lele02g1709	455	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	93	147	IPR017930	-
	Lele02g1709	455	SUPERFAMILY	Homeodomain-like	44	139	IPR009057	-
	Lele02g1709	455	Gene3D	-	44	97	-	-
	Lele02g1709	455	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	43	92	IPR017930	-
	Lele02g1709	455	ProSiteProfiles	Myb-like domain profile.	93	143	IPR001005	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele02g1709	Lele-ChrLele02	20638716	20641346	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele02g1709	23	455	MYB Transcription Factor Family	AT4G26930	37.554	6.23e-69	223

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MYB	Lele02g1709		Myb_DNA-binding	2.3e-11	CL0123