Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1657 ATGAAGCACGTGGGGGAATCAGGAATCGCTCCGTGTGCTTTCCCGCATCATATCGCTGCCGAAGGCAAGAAAAGAAGTCTCCGCCGATACTTATCGCGCAATCGACACGAAAAACGACGCGGCGGTGATAGAGCATCTTCAAATTCTCGCCTCCTTAAAAGGACAATGGCATCATCTTCCGACTCATGGATGAAGGAATATAATGAAGCCGTTAAACTTGCTGATGATATCAGTGGCATGATTTCCGAACGGAATTCATTTCCTACATCTGGACCTGAAACCCAGCGCCATGCATCTGCTATAAGAAGGAAGATAACAATATTAGGGACCAGACTTGATAGCTTGCAATCCCTTTTGTCAAAGTTTCCCGGGAAACAACCTATATCTGACAAGGAGCTGAATCGGCGTAAGGACATGGTTGCGAATTTGAGGTCTAAAGTTAACCAAATGGCATCAACATTGAATATGTCTAACTTTGCAAACAGGGATAGTTTGCTCGGACCAGAGACAAAACCAGCTGATGCCATGAGCAGAACAGTTGGCTTGGATAACGGTGGAGTTGTTGGACTTCAACGGCAAATTATGAGAGAGCAAGATGAGGGCCTTGAGAAATTGGAGCAGACTGTAACAAGTACAAAACATATTGCATTGGCTGTAAATGAAGAACTGGATTTACACACTAGACTCATTGATGACTTGGACCAGCATGTAGATGTTACAGATTCTCGGCTGCGGAGGGTGCAGAAGAACTTGGCAATTTTGAACAAGCGTACCAAGGGTGGTTGCTCCTGCTTGTGTTTGCTTTTATCAGTTGTTGGTATAGTGGTTTTGGTTGCTGTTATATTTGTGTTGATCAAATGTTTGTGA 867 0.4418 MKHVGESGIAPCAFPHHIAAEGKKRSLRRYLSRNRHEKRRGGDRASSNSRLLKRTMASSSDSWMKEYNEAVKLADDISGMISERNSFPTSGPETQRHASAIRRKITILGTRLDSLQSLLSKFPGKQPISDKELNRRKDMVANLRSKVNQMASTLNMSNFANRDSLLGPETKPADAMSRTVGLDNGGVVGLQRQIMREQDEGLEKLEQTVTSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLAILNKRTKGGCSCLCLLLSVVGIVVLVAVIFVLIKCL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1657 288 PANTHER SYNTAXIN 86 274 IPR045242 -
Lele02g1657 288 FunFam syntaxin-51 isoform X2 194 256 - -
Lele02g1657 288 Pfam SNARE domain 229 279 IPR000727 -
Lele02g1657 288 MobiDBLite consensus disorder prediction 32 58 - -
Lele02g1657 288 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 192 254 IPR000727 -
Lele02g1657 288 Gene3D - 194 256 - -
Lele02g1657 288 SMART tSNARE_6 187 254 IPR000727 -
Lele02g1657 288 SUPERFAMILY SNARE fusion complex 184 253 - -
Lele02g1657 288 CDD SNARE_Qc 195 252 - -
Lele02g1657 288 SUPERFAMILY t-snare proteins 81 155 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1657 Lele-ChrLele02 20316221 20318991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1657 56 288 SNARE and Associated Proteins AT1G16240 72.103 8.62e-124 351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g1657 02 20316221 20318991 Lele02g1657 02 20316221 20318991 ECH
Lele02g1657 02 20316221 20318991 Lele03g1387 03 8373682 8376454 hybridization
Lele02g1657 02 20316221 20318991 Lele04g1643 04 21249975 21254904 hybridization