Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1656 ATGACTTTAAATGAAGATAATTTATGGCTACTAGATAGCTGTCCTCTAATGTTTTTCACAATTCCGAAAGAGTCAATTGAAGTCATTGCGCAGAGCGTTGGCATCTCCAATTTGTCCTCTGATGTCGCTCTCGCTCTCGCTCCCGATGTGGAGTATAGGGTTCGCGAAATTATGCAGGAGTCTATAAAATGCATGCGCCACTCAAAGCGAACTGTTCTTACGTCAGATGATGTGGATAGTGCACTTAAATTAAGAAATCTGGAGCCGATATATGGTTTCACCTCTAATGATCCTCTGCGGTTCAAAAGAGCTGCTGGACACAAGGATTTGTTCTACGTTGATGACAAAGATGTTGATTTTAAAGATGTGATTGAAGCACCACTGCCAAAAGCACCTCTTGATACATCAGTTACCAATCATTGGCTGGCAATTGAAGGTGTACAGCCTGCAATTCCTGAAAATGCTCCCATTGAAGCTCCCTCTGAAACAAGAAAATCTGACTATAAGGAAGACCTTCCTGTTGATATTAAATTACCTGTTAGACATGTACTTTCAAGAGAGCTTCTGCTTTACTACCACAAAATAACTGAGCTGATATCAAACAAGCCAAGCACAATTCTCTTGAATAGAGCATTAATTAGCTTGGCAACAGATTCGGGGCTCCATCCTTTGATTCCTCATTTCTCATACTTTGTTGCTGGTGAGGTGGCTCAAAATTCAAATAATTTAAATCTTTTATTTGCTTTGATGCGTCTTGTTCGGAGCCTTACGCAAAATCCTCACATACACATAGAGCCTTATTTACATCAACTGATGCCGTCTATTATGACCTGCCTTGTTGCAAAAAAGCTAGGGAATAGACTATCTGACAATCACTGGGAACTCAGAAACTTCAGTGCAAACCTGGTTGCTTCGATATGCAAAAGATTTGGGCATGTTTATCATAACCTTCAGCCACGTGTGACAAAGACATTGCTTCATGCTTTCTTGGACCCTACAAAATCTCTACCTCAACATTATGGTGCAATTAAAGGGATAGCAGCTCTTGGATCCAGCATGGTTCGCATGCTTATACTTCCAAATCTTGAGGCATATCTGCTTCTTCTTGAACCAGAAATGCAACTTGAGAAGCAAAAAAACGCATTAAAGAGGCATGAAGCATGGCAAGTTTATGGAGCATTGCAGTGCGCAGCAGGCCAATGTATTCATGAACGGGCCAAAGTGTACAGCCGTATGCTCTTTCCTGCTTCTACTCGTGCTTTTTCAAGAGGCTATGGAAAAGTCATGACGGCAACGTCAAACAAACGTAAAGCCAGCATAGACAATCTAATGCAGCAACCTCCACTGAAGAAAATTGCAACAGATGTTTCTGGGGGTTTGATGCCTATGAACTCCTTGCCGGTTGATATGCAAATTCAAGGCGCACCAGGTGGATTTTCCAATACAATGGGAGCTCCTAACGCGGGCATGTCCTCAATGGCTCGTCAGTTATTAAATGAAAAGAACCAAGGAAGAGAGGTTGGAGGTCAACAAGGTAAGGTATCAGCAACTCTTGCTCAGGCTTGGAAGGATGACATTGATGCCGGACATTTGCTATCATCTGTACATGAACTATTCGGCCATGGCGTTTTCTCCTTTATTCCAAAAGCTGAAGCATCTATATTCTTGTGA 1671 0.4201 MTLNEDNLWLLDSCPLMFFTIPKESIEVIAQSVGISNLSSDVALALAPDVEYRVREIMQESIKCMRHSKRTVLTSDDVDSALKLRNLEPIYGFTSNDPLRFKRAAGHKDLFYVDDKDVDFKDVIEAPLPKAPLDTSVTNHWLAIEGVQPAIPENAPIEAPSETRKSDYKEDLPVDIKLPVRHVLSRELLLYYHKITELISNKPSTILLNRALISLATDSGLHPLIPHFSYFVAGEVAQNSNNLNLLFALMRLVRSLTQNPHIHIEPYLHQLMPSIMTCLVAKKLGNRLSDNHWELRNFSANLVASICKRFGHVYHNLQPRVTKTLLHAFLDPTKSLPQHYGAIKGIAALGSSMVRMLILPNLEAYLLLLEPEMQLEKQKNALKRHEAWQVYGALQCAAGQCIHERAKVYSRMLFPASTRAFSRGYGKVMTATSNKRKASIDNLMQQPPLKKIATDVSGGLMPMNSLPVDMQIQGAPGGFSNTMGAPNAGMSSMARQLLNEKNQGREVGGQQGKVSATLAQAWKDDIDAGHLLSSVHELFGHGVFSFIPKAEASIFL 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1656 556 SUPERFAMILY ARM repeat 240 373 IPR016024 -
Lele02g1656 556 Gene3D Histone, subunit A 19 84 IPR009072 GO:0046982
Lele02g1656 556 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6 19 553 IPR037796 GO:0000124|GO:0005669|GO:0006367|GO:0016251|GO:0046695
Lele02g1656 556 SUPERFAMILY Histone-fold 19 93 IPR009072 GO:0046982
Lele02g1656 556 FunFam transcription initiation factor TFIID subunit 6 18 83 - -
Lele02g1656 556 Gene3D - 181 385 IPR046344 GO:0006367
Lele02g1656 556 SMART TAF_cls 19 85 IPR004823 -
Lele02g1656 556 CDD TAF6C 181 397 IPR011442 GO:0006367
Lele02g1656 556 FunFam transcription initiation factor TFIID subunit 6 180 385 - -
Lele02g1656 556 Pfam TAF6 C-terminal HEAT repeat domain 275 362 IPR011442 GO:0006367
Lele02g1656 556 Pfam TATA box binding protein associated factor (TAF) 20 83 IPR004823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1656 Lele-ChrLele02 20310490 20315900 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g1656 02 20310490 20315900 Lele26g1557 26 12138729 12165058 CCT
Lele02g1656 02 20310490 20315900 Lele28g1549 28 12764668 12786204 CCT
Lele02g1656 02 20310490 20315900 Lele02g1656 02 20310490 20315900 ECH
Lele02g1656 02 20310490 20315900 Lele03g1386 03 8365550 8369882 hybridization
Lele02g1656 02 20310490 20315900 Lele04g1642 04 21244082 21248349 hybridization