Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1644 ATGCACAATCTAAGGTCACTATCTGCATCATTCTTTTCTAGTGTGGCCTTCTTTGTTGCTCCTCTTCTGCTTGAAGTGCAATATTATGTTCTTATGTCTCTGTTGTTATGTGAACACAATCCTAAGTACATGTTAAGATGTGTCCATTACATCTGTTGTCTTGCTGTTCTCATGAATGTCAGAAAAGGGAAAGTGTCCTCCTTTAGCTTCTCACAATTTGAGTTTGCTCCCCAACTGTTTTACAAAATGCCACAAGGAGAAATTTGCAGTTCGGTTACAGAACCACGTTCTGTGGTCAGGAAGTTCTTGGCCAGGCCTCAGCATGAAGGTGTTGGGGCCATTGTTAGAAGAAGCATTGGACGGTTTGAGCTGAAGCACTTTGATCCATTCCTTGTACTTGATGAATTCTCAGTCACTGCCCCAGCTGGCTTTCCTGATCATCCACATAGAGGATTTGAGACTGTCACATACATGTTGCAGGGAGCTGTGACACATGAAGATTTTGAAGGACACAAAGGAACAATAGAAGCCGGAGATTTGCAGTGGATGACTTCAGGGAGAGGGATAGTCCACTCAGAGATGCCTGCAGCTCAAGGAACCCAAAAGGGCCTACAGCTTTGGATCAACCTCTCTTCCAAACATAAAATGATTGAGCCAAGGTATCAAGAGATGCTTAGTAAGGACATAGCAGAAGGTTCAAAAGATGGAATCAAAGTGAGAGTAATAGCAGGTGAAGCCTTAGGAATAAAGTCTCCTATCCAAACAAGGACTCCAACAATGTACTTAGACTTCACTCTCAAACCAGGATCCCACCTGCAACAACCCATACCAGAATCTTGGAATGCTTTTGTTTATGTGTTGGAAGGAGAGGTCGTGTTTGGCAGCCCTAAATCTCAGCCTGTGACTTCCCATCACATCCTTCTTCTTGGTTCTTCTGGTGATGGCTTGGAGGCTTGGAATAGGTCTGCTCATGAGGTGGTTCGGTTCATTCTGGTTGGGGGTAAACCGTTGGGTGAGCCTCTGGTTCAGTTTGGACCGTTTGTGATGAACACTCAAGAGGAGATTGATCAAACTGTGAGTGATTTTGAGAACTGTGTTAATGGGTTTGAGAAAGCTAGACATTGGAGATCTGAAGCTGCAATTGGTCTTGATTTTTAG 1158 0.4396 MHNLRSLSASFFSSVAFFVAPLLLEVQYYVLMSLLLCEHNPKYMLRCVHYICCLAVLMNVRKGKVSSFSFSQFEFAPQLFYKMPQGEICSSVTEPRSVVRKFLARPQHEGVGAIVRRSIGRFELKHFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGAVTHEDFEGHKGTIEAGDLQWMTSGRGIVHSEMPAAQGTQKGLQLWINLSSKHKMIEPRYQEMLSKDIAEGSKDGIKVRVIAGEALGIKSPIQTRTPTMYLDFTLKPGSHLQQPIPESWNAFVYVLEGEVVFGSPKSQPVTSHHILLLGSSGDGLEAWNRSAHEVVRFILVGGKPLGEPLVQFGPFVMNTQEEIDQTVSDFENCVNGFEKARHWRSEAAIGLDF 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1644 385 CDD cupin_pirin_C 258 336 - -
Lele02g1644 385 Gene3D Jelly Rolls 109 363 IPR014710 -
Lele02g1644 385 SUPERFAMILY RmlC-like cupins 97 377 IPR011051 -
Lele02g1644 385 CDD cupin_pirin_N 115 210 - -
Lele02g1644 385 PANTHER PIRIN-RELATED 90 379 IPR012093 -
Lele02g1644 385 FunFam pirin 109 243 - -
Lele02g1644 385 Gene3D Jelly Rolls 230 337 IPR014710 -
Lele02g1644 385 Pfam Pirin C-terminal cupin domain 261 367 IPR008778 -
Lele02g1644 385 Pfam Pirin 115 208 IPR003829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1644 Lele-ChrLele02 20267575 20274570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1644 95 373 Calmodulin-binding Proteins AT3G59220 56.429 4.76e-119 345