Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1628 ATGTCTATGCATGAGGAGAGATTTGAGAAGCCTTCATCTTTGTCATGCCAAGATGTCAATATGTATGGTCAAGAGTCTCACGCTACCGAGCCCAACAGTAACCCAGAGTTGTCTTTTGTAGCAGCAAATGATGATGGTCGTGAGGGTGCAGGATTATCTTCCAATAGGATCAATGATGAGGTTGATGATGACAACCCCTTCTCAAAGCGAAGGAAGGTGGAGAATGGAAATGCTGACATCACTCCTATAGTTAAGCCTATTCGAGAACCAAGGGTTGTTGTACAAACTCTAAGTGAAGTTGACATACTGGATGATGGGTATCGCTGGCGAAAGTATGGGCAGAAGGTGGTGAGAGGCAATCCTAACCCTAGGAGTTACTACAAATGCACAAATGCCGGTTGCCCTGTTAGGAAACATGTGGAGAGGGCTTCTCATGATCCCAAAGCAGTAATAACCACTTATGAGGGTAAGCACAATCATGATGTACCTACTGCAAGGAATAGTAGCCATGATACAGCAGGACCAGCAGCTCCTGTTGGACAGACACGAATAAGATCGGAAGAAAGCGATACCATTAGCCTCGACCTCGGGATGGGTATCAGCTCGGCTGCTGAAAATAAATTGAAGGGGCAAGGGCAAATGCTACTCTCCGAATTTGGGAATGGTCAAAGTCATGCCAACAATTCCAATTTCAAGTTTGTTCATAATGCTCCAGCTCCAGCATTCTTTGGTCTTCTAAACAATGGCTCAAATCCATTTGGATCTTCTAGAGAACCCCCATCTTTGAACCATACCAAATATCGGTGCCCGCAGCCGCAGGGCATGGGAAGAATACTAACAGGTCCATGA 849 0.4558 MSMHEERFEKPSSLSCQDVNMYGQESHATEPNSNPELSFVAANDDGREGAGLSSNRINDEVDDDNPFSKRRKVENGNADITPIVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARNSSHDTAGPAAPVGQTRIRSEESDTISLDLGMGISSAAENKLKGQGQMLLSEFGNGQSHANNSNFKFVHNAPAPAFFGLLNNGSNPFGSSREPPSLNHTKYRCPQPQGMGRILTGP 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1628 282 MobiDBLite consensus disorder prediction 57 74 - -
Lele02g1628 282 MobiDBLite consensus disorder prediction 159 186 - -
Lele02g1628 282 MobiDBLite consensus disorder prediction 13 39 - -
Lele02g1628 282 Pfam WRKY DNA -binding domain 104 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele02g1628 282 SMART WRKY_cls 103 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele02g1628 282 ProSiteProfiles WRKY domain profile. 98 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele02g1628 282 Gene3D WRKY domain 88 164 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele02g1628 282 FunFam WRKY transcription factor 33 90 156 - -
Lele02g1628 282 SUPERFAMILY WRKY DNA-binding domain 95 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele02g1628 282 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 26 194 IPR044810 GO:0003700
Lele02g1628 282 MobiDBLite consensus disorder prediction 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1628 Lele-ChrLele02 20164229 20165618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1628 1 282 WRKY Transcription Factor Family AT4G26640 55.068 9.99e-96 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele02g1628 WRKY 4.9e-26 CL0274