Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1611 ATGGCCACAAATGATCGCCGTTTTGTAGAATGGAAGGAGCAGTTTATTTCACAGGAGCGTGGCAATCGTATAGTCCACTATTACCTGAAGGATTCTGCTGGGGATTCCATACTTGCGGTTGTGGGCACTGAGAGGAGCCTGAGACACATGTTCTATGTTGTTGCTGATGAGTTTCTTGAAGTTTGTGGGAAGGAGGGTGCCATCCATGCCGGTTTCAAATGGCGGTCCAGAAGAGAGGTTGTCGATTGGTTGACATCAATGCTATCAAAGCAACATCAGCTGGGAGACAAGAGTGCGTTGCCAAATCATAACTTGACACAAGCTCATGAGACCACAAATAGCAGTCTCAAAGAATTTATTGACCTGCATGCACAGATATCAGATAAGGGCCTTCTAATGAGCAGCTTCAAAGGACAAAATTCTGACATTGTTTGGTCAGGCGCGGCCTGGACATGTGGCAAACAGCTTAAACACTATCCTGCTTTTTCCAGGAATGGGATCAAAATAGCTATTCAATCTTTCGTCTTTGTCATGGCAACGGGAGAGAATCATTATATTGCATATTTGGAGGACATGTATGAAGACAGGAGGGGTCAGAAAAAGGTTAAAGTGAGGTGGTTTCACCATAATCAGGAAGTCAAGGGTGTAATTCCCGTGAGAAATCCTGACCCTCAAGAAGTTTTTATCACATCTTATTCTCAAGTGATTAGTGCTGAGTGTGTTGATGGCCCTGCTACCGTCTTGACTCGGGAACATTATGGAAAACTCTTGCCTGCGTTTTCGTCTGCCTCATCAAATAGAATCCATTTGTGCTTTAGGCAGTTCAGAAACAACAAAGTGAAGGCCTTTGACTTGAGTAAATTGCGTGGTTACTATGATCAACCAATTCTCTCTTGCTTGAACCTTGATTCCTTCCAAAACCCTAAATCTAATAGCCTTGCAGAAGAGGATGAAGAGTTGAGCCTAGGTGATGATGTAAGGCCTGAATGTAAGAGGAGCAAAAGAGGTAGAGGGTCTTCCCAGCATTTGATAGATTGCCGAGTTAGGAAATTAAGTAGAAGTCAACAAATGATGGTGAACAAAACCATTGAGAATGTAGATTATGCTAGGCCAGATAGGAGATTACTTTCCCGGAAACAGGTTGATTATCAGCCCTGGTATAACTCCAAATACAAAGTTGATGACAAGATAGAGTTACTCTGTCAAGACAGTGGCATAAGAGGCTGCTGGTTCAGGTGTACAGTTGTGCAAGTATCCCGGAAACAGATAAAAGTCCAATACAATGATGTGCAGGATGAAGATGGAGGCGGCAATCTTGAGGAGTGGATCCCGGCTTTCAAACTTGCCATATCTGATAAACTTGGGATGAGGCATTCTGGCCGCCCCACCATCAGGCCAGCTCCAACTCATGAGGGGCAACAAGAACCGGCTATTGAGATTGGAACTGCAGTAGATGCATGGTGGAGTGATGGTTGGTGGGAGGGGGTTGTTAGTGGAACTGGTGACGGTGATGATGATAATGTGCAAGTTTACTTTCCAGGTGAAGGTTTGTTAAGGAAAGTGTGCAAGAAGGATCTAAGAGTATCAAGAGATTGGCTGGGAGACCGATGGGTCGATATTGAGCTAAAGCCTAATGTAGTCTCTACCATATCTGCAGTTAATAGCTCTAACACAAAGTTTTCAGTGTCCCCATCTACCACTAAAGATGTTGACTCCTCCGGGGTTGCTATTTCATGTCAAGATGTTCCTATTAATGAGAAATCCAATGAACTGAACGATGTTGCTGAAGACATGAATCAGGTTATGGATAACAAGCCCACTTCACAAGAAGAGACAATTACTGAAGTCGCTGAGACTGAGCAACATGGAAGTTGCGATAACGATAATGCAGATAACTATGACAACAACAAAGACAATAAGGAAGAGAATGATGGCGATGATAACAAGAGGTTTGATAATGATGTGAAGGATATGGAGGTGCTTGGGACTTCTGGGGAGGACTCGAAAGCCATGGAACCCATGGAAGTGGCTGTTTAA 2037 0.4379 MATNDRRFVEWKEQFISQERGNRIVHYYLKDSAGDSILAVVGTERSLRHMFYVVADEFLEVCGKEGAIHAGFKWRSRREVVDWLTSMLSKQHQLGDKSALPNHNLTQAHETTNSSLKEFIDLHAQISDKGLLMSSFKGQNSDIVWSGAAWTCGKQLKHYPAFSRNGIKIAIQSFVFVMATGENHYIAYLEDMYEDRRGQKKVKVRWFHHNQEVKGVIPVRNPDPQEVFITSYSQVISAECVDGPATVLTREHYGKLLPAFSSASSNRIHLCFRQFRNNKVKAFDLSKLRGYYDQPILSCLNLDSFQNPKSNSLAEEDEELSLGDDVRPECKRSKRGRGSSQHLIDCRVRKLSRSQQMMVNKTIENVDYARPDRRLLSRKQVDYQPWYNSKYKVDDKIELLCQDSGIRGCWFRCTVVQVSRKQIKVQYNDVQDEDGGGNLEEWIPAFKLAISDKLGMRHSGRPTIRPAPTHEGQQEPAIEIGTAVDAWWSDGWWEGVVSGTGDGDDDNVQVYFPGEGLLRKVCKKDLRVSRDWLGDRWVDIELKPNVVSTISAVNSSNTKFSVSPSTTKDVDSSGVAISCQDVPINEKSNELNDVAEDMNQVMDNKPTSQEETITEVAETEQHGSCDNDNADNYDNNKDNKEENDGDDNKRFDNDVKDMEVLGTSGEDSKAMEPMEVAV 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1611 678 Gene3D - 136 299 IPR043151 -
Lele02g1611 678 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 390 622 - -
Lele02g1611 678 ProSiteProfiles BAH domain profile. 167 286 IPR001025 GO:0003682
Lele02g1611 678 Pfam Agenet domain 394 468 IPR008395 -
Lele02g1611 678 MobiDBLite consensus disorder prediction 604 678 - -
Lele02g1611 678 SMART BAH_4 167 287 IPR001025 GO:0003682
Lele02g1611 678 SMART agenet_At_2 476 534 IPR014002 -
Lele02g1611 678 SMART agenet_At_2 389 454 IPR014002 -
Lele02g1611 678 MobiDBLite consensus disorder prediction 615 663 - -
Lele02g1611 678 Coils Coil 584 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1611 Lele-ChrLele02 20040897 20044391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1611 403 532 PHD Transcription Factor Family AT5G58610 27.068 4.22e-10 61.2