Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1610 ATGGGGTCATCTAAAGTTTCAGTTTTTCCACTTTTGGTTTTCTGGGTATTTGTTCATCAGTTGAATTTAGCAGGAGGTCTCTCATCCTACGACTCCTACGATCAAAGCAATGTCAGAAACTACATTAGCTGGAAGGATTTGTGGGTGAATGAACAAAGGTTGACCTGGGACCCCATTGAAGATGCTCGAGTTATTGTCGTTGACCAGCTTGGCAGAGGACATTCTAGAACTGTACAAGGAGCTGTAGATATGGTTCCTGATAACAAGTCAGAAAGAATCAAAATTTACATATACCCAGGAATTTACAGAGAGAAAGTGTATGTGGCAAGAACAAAGGGGTATGTATCAATGATAGGAGGACACGATGGAGCAGAGAGCGCAGTGATTACGTGGAATAGTAAATCATCGGACAGAGGTTTTGATGGACAAGAACTTGGGACCTATGCTTCTGCAACTGTGACTGTAGAATCTGATTATTTCTGTGCAACCAGGCTCACTTTTGAGAACTCGGTGGAGGCGGTGAACGGAGGAGATGGAATGCAAGGAGTGGCACTGAGGGTGGACAGTGAAAGGGCCATGTTTTATAGGGCAAAATTGATTTCATATTTGGCAATGCAAAATCACTCTATCAGGACTGCTGAGTTTGGGGAGTACGAGTGTGAGGGAATGGGAGCAGATAGAAGAGGAAGGGTAGAATGGTCAAAATTTTTGAGCTACGAGGAAGCAAGGCCTTTTCTGGATAAAACTTTCATAAATGGGGACCATTGGCTTATGCTATAG 780 0.4333 MGSSKVSVFPLLVFWVFVHQLNLAGGLSSYDSYDQSNVRNYISWKDLWVNEQRLTWDPIEDARVIVVDQLGRGHSRTVQGAVDMVPDNKSERIKIYIYPGIYREKVYVARTKGYVSMIGGHDGAESAVITWNSKSSDRGFDGQELGTYASATVTVESDYFCATRLTFENSVEAVNGGDGMQGVALRVDSERAMFYRAKLISYLAMQNHSIRTAEFGEYECEGMGADRRGRVEWSKFLSYEEARPFLDKTFINGDHWLML 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1610 259 Pfam Pectinesterase 65 203 IPR000070 GO:0030599|GO:0042545
Lele02g1610 259 Gene3D - 28 204 IPR012334 -
Lele02g1610 259 SUPERFAMILY Pectin lyase-like 62 257 IPR011050 -
Lele02g1610 259 Gene3D - 205 259 IPR012334 -
Lele02g1610 259 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 210 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1610 Lele-ChrLele02 20038111 20040059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1610 5 200 Carbohydrate Esterase AT5G55590 44.700 1.55e-51 169